DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wdr24 and wdr59

DIOPT Version :9

Sequence 1:NP_733303.2 Gene:Wdr24 / 43505 FlyBaseID:FBgn0027518 Length:777 Species:Drosophila melanogaster
Sequence 2:XP_009291658.1 Gene:wdr59 / 103909113 ZFINID:ZDB-GENE-120215-187 Length:982 Species:Danio rerio


Alignment Length:1051 Identity:194/1051 - (18%)
Similarity:316/1051 - (30%) Gaps:384/1051 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 EGHANALALNKDNNQIALAGRSLLKVYSINSNGFTESCNMRGKNQNLSYSANDVAWS--TLDSNL 80
            :..|||::::.......|:||..|.|.::.    |.|...|..::...:....|.|:  ..|:::
Zfish    16 DAQANAMSVDCLGQHAVLSGRRFLYVVNLE----TPSEAPRKISRQSKWDVGTVQWNPHKSDAHI 76

  Fly    81 LATAATNGV-VSVWDLSKFGRQKQLLVYNEHERTAHTVTFHSSEPNILISGSQDGTIKCFDIRSD 144
            .|.::...| :..|   :.|..|.......|.|....:.:...||..|::.|.|..|..:|....
Zfish    77 FAASSNQRVDLYTW---RDGSGKSHTSLQGHTRVISDLDWSWFEPEFLVTSSVDTYIYIWDTSDT 138

  Fly   145 KSINTYFCNSESVRDVKFSPHTQNIFSAVSENGTVQLWDMRKWDKCMVQFTAHYGPVYTCDWHPT 209
            :..............||:: ...:...|.|.:|.|::||.||.:..:....||...:...||||.
Zfish   139 RRPTVTLSAVAGASQVKWN-RRNHYCLASSHDGDVRIWDKRKSNTAVEYVAAHLSKINGLDWHPD 202

  Fly   210 RNW-LATGSRDKQIKVWNMDGRPGLEHTIHTIAVVGRVKWRPERTY-HIASCALVVDYSVHVWDI 272
            ..: |||.|:|..::.|:                     :|..|.| .|.||      .|.||..
Zfish   203 NEYILATSSQDNSVRFWD---------------------YRQPRKYLDILSC------QVPVWKA 240

  Fly   273 RRPYIPFA------------------------------SFNEHTNVTTGIAW----QGSDSHCLL 303
            |  |.||:                              :|..|.:|.....|    :||....|:
Zfish   241 R--YTPFSNGLVTVMVPQLRRENSLLLWSTLELNSPVHAFVGHDDVVYEFQWRPQKEGSKDCQLV 303

  Fly   304 SISKDSTI-----------------YKHAFKDATRPALKANAQGASL--GRFGDISFANKIKEYE 349
            ::|:|.|:                 ........|...|::......|  |...|    |.:.:::
Zfish   304 TLSRDQTLRIWRVDPQLQKLCCANEIVDELTTETEKTLRSQDSEPPLSPGFTAD----NSLDQFD 364

  Fly   350 PKTSGASNT------------------------------KSSSFIS----------------RRK 368
            ...||.|::                              ..|.|:|                :..
Zfish   365 GPQSGLSSSAKNDIPQTLQQEFSLVNLQIRNVNVEMDAVNRSCFVSADCGANRVRLVVKFPAQYP 429

  Fly   369 TNVAGSIQF----HLDHSKMYKF--MVNDTFSGYPLSESVSRPTQEHESFIGCARELV------- 420
            .|.|.|.||    ::..|...|.  ::.||        |:.:..:.......|.|:||       
Zfish   430 NNAAPSFQFVPPTNISSSMKIKIQKILTDT--------SLQKVKRNQNCLEPCVRQLVSCLESDG 486

  Fly   421 -----------------------------------------ISG--------------------- 423
                                                     .||                     
Zfish   487 VMEDGSNPYVLTNPVTPALPAFPRVTNTYGSYQDANIPFPRTSGARFCGTGSLVYFTRPMTMHRA 551

  Fly   424 --------KKLSELCEHNAEV--SKKYGKHNATTLWNFIKLFYGSNHFEPPFEHR------SSFS 472
                    :.||.|..:::.|  ..|....:.|||    :|:.||    |....:      |.:.
Zfish   552 TPPTEPTPRSLSALSAYHSGVMTPMKMRTESQTTL----RLYSGS----PTRTDKDQVSISSFYY 608

  Fly   473 NQKNPMNSRR--ATQVASDWPQQRTELGQDLNG---NTP-------------------ETAHEID 513
            .::.|:::.|  :.|...:.|:.|...|:...|   |.|                   :...|..
Zfish   609 KERKPLSAARRWSVQTIHECPKSRRWKGKREGGDYSNRPIKLAGKVIIQEISCLLSVHKALGETY 673

  Fly   514 VANVDD--DTLGSSGVEHPPTSSVILSETQIISEITFDNFELLRNGFIYVGPTECPKA------- 569
            |.||:|  ||...:|......:...|::...::..:.:         :.:.|...|.|       
Zfish   674 VLNVNDIQDTCQKNGAAALAVARRDLAKVWALASASTN---------LNLSPDPDPDAGTPWAKH 729

  Fly   570 -----LAFPALHH-----DVQAARPQLDLKASDHEKSPPPHVPTVLKVSHVPPIP-MWEPH---- 619
                 |....|.|     |||:    |.:..|.......|.....| ..|..|.| ::.||    
Zfish   730 PFGRHLLETLLEHYSQLSDVQS----LAMLCSVFRGHGSPQEYFTL-YGHQQPRPAVFTPHHSRY 789

  Fly   620 -KFVSDALMLMNDVGDVQTALTVLIALGEARKLLPI------DDALVEHWFYT------------ 665
             .|.|.::...:......:|.|.....|...:..|.      ||....:..||            
Zfish   790 PSFTSSSVTSGSCSSTSDSANTPWNTGGRESEHPPSWGESTPDDYRYANQTYTDPREREKEQHDM 854

  Fly   666 -------------------YVDQLHRYELWNEACEVINRSWLRSVQQLNQHSTAMHTNCGECGRP 711
                               |.:.|||:.:.::..||:.                 ..:|..  .|
Zfish   855 NKRLLDPSNSWQFDDFKKCYGEILHRWGMKDKRAEVLK-----------------FVSCPP--EP 900

  Fly   712 MGG-KVGWYCDKCKSM----QSA-------KCCVCGLIVRGVYAWCQGCSHGGHIEHLQKYFAKH 764
            ..| :.|.||..|:|.    |.|       :|.:|.:.|||...:|..|.||||..|:..:|...
Zfish   901 HKGIEFGVYCCHCRSQARGTQCAVCKRFTFQCSICHVAVRGSSNFCLSCGHGGHTSHMMDWFRSQ 965

  Fly   765 SKCPK-CGHLC 774
            ..||. ||..|
Zfish   966 DVCPTGCGCHC 976

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr24NP_733303.2 WD40 13..311 CDD:238121 72/331 (22%)
WD40 22..>312 CDD:225201 72/345 (21%)
WD40 repeat 70..109 CDD:293791 8/41 (20%)
WD40 repeat 115..152 CDD:293791 7/36 (19%)
WD40 repeat 157..194 CDD:293791 10/36 (28%)
WD40 repeat 202..236 CDD:293791 10/34 (29%)
WD40 repeat 243..283 CDD:293791 13/70 (19%)
Zn_ribbon_17 <720..777 CDD:305234 23/67 (34%)
wdr59XP_009291658.1 WD40 <34..314 CDD:225201 69/316 (22%)
WD40 repeat 62..103 CDD:293791 8/43 (19%)
WD40 97..>325 CDD:295369 54/257 (21%)
WD40 repeat 109..150 CDD:293791 7/40 (18%)
WD40 repeat 154..187 CDD:293791 10/33 (30%)
WD40 repeat 195..229 CDD:293791 13/54 (24%)
WD40 repeat 237..279 CDD:293791 6/43 (14%)
RWD <418..484 CDD:295432 14/73 (19%)
Zn_ribbon_17 932..980 CDD:305234 18/45 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D146113at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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