DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wdr24 and wdr24

DIOPT Version :9

Sequence 1:NP_733303.2 Gene:Wdr24 / 43505 FlyBaseID:FBgn0027518 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_001135538.1 Gene:wdr24 / 100216081 XenbaseID:XB-GENE-5898584 Length:783 Species:Xenopus tropicalis


Alignment Length:835 Identity:316/835 - (37%)
Similarity:452/835 - (54%) Gaps:145/835 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LEGHANALALNKDNNQIALAGRSLLKVYSINSNGFTESCNMR-GKNQNLSYSANDVAWSTLDSNL 80
            |:..|||:::.:|..|:.:|||::.|:||:..:.|.|..|:| |:..:|::|..||.|..:|.||
 Frog    20 LDAPANAISVCRDAAQVVVAGRNIFKIYSMEEDHFVEKMNLRVGRRPSLNFSCADVVWHQMDDNL 84

  Fly    81 LATAATNGVVSVWDLSKFGRQKQLLVYNEHERTAHTVTFHSSEPNILISGSQDGTIKCFDIRSDK 145
            ||||||||||..|:|.|..|.||..::.||:||.:.|.||.:|..:|:||||||.:||||:|...
 Frog    85 LATAATNGVVVTWNLGKPSRNKQDQLFTEHKRTVNKVCFHPTEVYMLLSGSQDGYMKCFDLRKKD 149

  Fly   146 SINTYFCNSESVRDVKFSPHTQNIFSAVSENGTVQLWDMRKWDKCMVQFTAHYGPVYTCDWHP-T 209
            |.:|:...|||||||:||......|:|..|||.|||||:|:.|:|...||||.|||:.||||| .
 Frog   150 SASTFSGQSESVRDVQFSIRDYFTFAATFENGNVQLWDIRRPDRCERMFTAHNGPVFCCDWHPED 214

  Fly   210 RNWLATGSRDKQIKVWNMDGRPGLE-HTIHTIAVVGRVKWRPERTYHIASCALVVDYSVHVWDIR 273
            |.|||||.|||.:|||:|:.....| :.:.|||.|.||||||||.|||.:|:::||::::|||:|
 Frog   215 RGWLATGGRDKMVKVWDMNTNRAKEIYCVQTIASVARVKWRPERKYHIGTCSMMVDHNIYVWDVR 279

  Fly   274 RPYIPFASFNEHTNVTTGIAWQG-SDSHCLLSISKDSTIYKHAFKDATRPALKANAQGASLGRFG 337
            ||:||||:|.||.:|||||.|:. .|.:.|||.|||||:|:|.|:||.||..:||.:|...|.||
 Frog   280 RPFIPFATFEEHKDVTTGIIWRHMHDPYFLLSGSKDSTLYQHIFRDARRPIDRANPEGLCYGLFG 344

  Fly   338 DISFANKIKEYEPKTSGASNTKSSSFISRRKTNVAGSIQFHL---DHSKMYKFMVNDTFSGYPLS 399
            |::||.|      ::..:|::.|||..|.||........|.|   |.::.:              
 Frog   345 DLAFAAK------ESLISSSSSSSSHDSNRKPYDRRHPIFFLRKPDPTEQF-------------- 389

  Fly   400 ESVSRPTQEHES-------FIGCARELVISGKKLSELCEHNAEVSKKYGKHNATTLWNFIKLFYG 457
            |::|......|:       |:..|....::|:.|:|||:|||.|::...:......|..:::.|.
 Frog   390 ENISSGLSVFEAGGGDMGWFVATAERYALAGRPLAELCDHNANVARDLNRWQVAQTWTMLRIIYC 454

  Fly   458 SNHFEPPFEHRSSFSNQKNPMNSRRATQVASDWPQQRTELGQDLNGNTPETAHEIDVANVDDDTL 522
            |....|......|                          ||:  :|:|....:..::..:....:
 Frog   455 SPGTVPSANLNHS--------------------------LGK--SGSTLPLLNSFNLKELPSGIV 491

  Fly   523 GSSGVEHPP----TSSVIL----------SETQ--------IISEITFDNFELLRNGFI------ 559
            |.|.:||..    |.|:::          .||:        ::.::..|..||    ::      
 Frog   492 GESRLEHSKGDSRTDSILMDPAAINNDENEETEGSDVPADYLLGDVEGDEDEL----YMMDQEQP 552

  Fly   560 ------YVGPTECPKALAFPALHHDVQAARPQLDLKASDH--EKSPPPHVP-------------- 602
                  ||.|.|     .|| |.|::..     :..|.||  ||:..|||.              
 Frog   553 HTEEQEYVLPQE-----GFP-LRHEIMD-----NPSALDHLQEKAESPHVSGNEAETVSLTPVES 606

  Fly   603 -TVLKVSHVPPIPMWE---PHKF----VSDALMLMNDVGDVQTALTVLIALGE-ARKLLPIDDAL 658
             :::.:||    .::|   |..|    |.|.|....:.||||.|.:|||.||| .||  .||:..
 Frog   607 FSLIAISH----SLYENRLPSDFFSPTVRDMLCFYAEQGDVQMAASVLIVLGERIRK--EIDEQT 665

  Fly   659 VEHWFYTYVDQLHRYELWNEACEVINRSWLRSVQQLNQHSTAMHTNCGECGRPMGGKVGWYCDKC 723
            .||||.:|:|.|.|::|||.:.:||..|...|:..|||.||.:|.||..|.|||..| ||.||:|
 Frog   666 QEHWFTSYIDLLQRFKLWNVSNQVIKLSTCSSINCLNQASTTLHVNCSNCKRPMSNK-GWICDRC 729

  Fly   724 KSMQSAKCCVCGLIVRGVYAWCQGCSHGGHIEHLQKYFAKHSKCPK-CGHLCAYS 777
            :...| .|.||..:|:|::.|||||.||||::|:..:...:|.||. |||||.||
 Frog   730 RQCAS-MCAVCHHVVKGLFVWCQGCCHGGHLQHIMNWMQNNSHCPAGCGHLCEYS 783

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr24NP_733303.2 WD40 13..311 CDD:238121 156/297 (53%)
WD40 22..>312 CDD:225201 155/293 (53%)
WD40 repeat 70..109 CDD:293791 22/38 (58%)
WD40 repeat 115..152 CDD:293791 18/36 (50%)
WD40 repeat 157..194 CDD:293791 19/36 (53%)
WD40 repeat 202..236 CDD:293791 19/35 (54%)
WD40 repeat 243..283 CDD:293791 25/39 (64%)
Zn_ribbon_17 <720..777 CDD:305234 27/57 (47%)
wdr24NP_001135538.1 WD40 81..319 CDD:421866 135/237 (57%)
WD40 repeat 119..156 CDD:293791 18/36 (50%)
WD40 repeat 161..198 CDD:293791 19/36 (53%)
WD40 repeat 206..242 CDD:293791 19/35 (54%)
WD40 repeat 249..289 CDD:293791 25/39 (64%)
mRING-H2-C3H3C2_WDR24 735..780 CDD:319607 21/44 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 304 1.000 Domainoid score I1378
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H6870
Inparanoid 1 1.050 522 1.000 Inparanoid score I1231
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D146113at33208
OrthoFinder 1 1.000 - - FOG0005790
OrthoInspector 1 1.000 - - oto103586
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4181
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.060

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