DRSC/TRiP Functional Genomics Resources

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Protein Alignment CIA30 and Ndufaf1

DIOPT Version :9

Sequence 1:NP_651718.1 Gene:CIA30 / 43503 FlyBaseID:FBgn0039689 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_001343396.1 Gene:Ndufaf1 / 69702 MGIID:1916952 Length:330 Species:Mus musculus


Alignment Length:288 Identity:104/288 - (36%)
Similarity:171/288 - (59%) Gaps:28/288 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 AVQQQIHTTAVHRTFWEREKKSGYKTKLPEPSKKQMIMDG-LRDLKEEM---KLWRQEVKEQFE- 76
            ::|:::  |:|.|...:.:.:.|    |.....|::.:|. ..|...|:   |..|.|..|.|. 
Mouse    41 SLQKKV--TSVDRASQQGKTEEG----LQGHDHKEVALDAPSPDRTPEVSFDKAIRDEAIEHFRR 99

  Fly    77 -SDPILVFRPG------------ETDVVFDFKAPDVLDKWTVTTDADHGEGKSTATLELSAAG-A 127
             .|.|:....|            :..||:.|:..:.||||.||:|...| |:|...|::|... :
Mouse   100 LKDEIVAHLRGPDGRPLQEVIMEQARVVWQFREKEDLDKWIVTSDKTIG-GRSEIFLKMSKNNRS 163

  Fly   128 GLFHGQVNSDHTKDGIIKRTGYANIRTKRVRKSFKRETTYDWTQYNMLVMKVRGDGRSYLINLHT 192
            .|.:|.::|:..:||..:::||..:.::..|.:|:|:.:|||:|:|.|.::||||||.:::|:..
Mouse   164 ALLYGTLSSEPPQDGDSRQSGYCAMISRIPRGAFERKLSYDWSQFNTLYLRVRGDGRPWMVNIRQ 228

  Fly   193 EGYFDLMWNDIYHYVLYTRGGPHWQIAKIPFSKFFLSSKGRVQDRQGAIPLNRVTHFGFSVAAKK 257
            :..|....|.:|.|.::|||||:||..||||||||.|::|||:|.||.:.|::::..||:::.| 
Mouse   229 DTEFIQRKNQMYSYFMFTRGGPYWQEVKIPFSKFFFSNQGRVRDVQGPLVLDKISSIGFTLSDK- 292

  Fly   258 GMDGPFGLEIDYVGLEYDPSHREEFAYE 285
             :||||.||||::|:..||:|.||||||
Mouse   293 -VDGPFFLEIDFIGVFTDPAHTEEFAYE 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CIA30NP_651718.1 CIA30 92..267 CDD:285718 71/175 (41%)
Ndufaf1NP_001343396.1 CIA30 128..301 CDD:369941 71/175 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849809
Domainoid 1 1.000 148 1.000 Domainoid score I4438
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H32289
Inparanoid 1 1.050 177 1.000 Inparanoid score I4020
Isobase 1 0.950 - 0 Normalized mean entropy S5425
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007033
OrthoInspector 1 1.000 - - oto93540
orthoMCL 1 0.900 - - OOG6_103519
Panther 1 1.100 - - LDO PTHR13194
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2453
SonicParanoid 1 1.000 - - X5127
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.870

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