DRSC/TRiP Functional Genomics Resources

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Protein Alignment CIA30 and nuaf-1

DIOPT Version :10

Sequence 1:NP_651718.1 Gene:CIA30 / 43503 FlyBaseID:FBgn0039689 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_506361.1 Gene:nuaf-1 / 183640 WormBaseID:WBGene00008225 Length:340 Species:Caenorhabditis elegans


Alignment Length:258 Identity:95/258 - (36%)
Similarity:142/258 - (55%) Gaps:13/258 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 PEPSKKQMIMDGLRDLKEEMKLWRQEVKEQFES---------DPILVFRPGETDVVFDFKAPDVL 100
            |:.|.|:::.:.....|.:.....:|:|..|.|         :.|...|..|..|.:.|...:.|
 Worm    81 PDFSIKELVAELPNTRKTQGAKLSEEIKNAFNSVSIEKTELLEDIGFVRHNEARVDYRFDTQEKL 145

  Fly   101 DKWTVTTDADHGEGKSTATLELSAAGAGLFHGQVNSDHTKDGIIKRTGYANIRTKRVRKSFKRET 165
            |.|.:..|:|..||.||.:|..|..|..:|.|.:::...|||.::|.|:|:::.:. ||:|.|:.
 Worm   146 DLWKIGCDSDWKEGFSTCSLVNSDRGTAVFSGNISTKVLKDGRVERAGWASMKLED-RKAFNRKK 209

  Fly   166 TYD-WTQYNMLVMKVRGDGRSYLINLHTEGYFDLMWNDIYHYVLYTRGGPHWQIAKIPFSKFFLS 229
            ... |..::.|::|||||||||.|.||:....|..|.|.:.:.|:|.|||:||..||||||||.:
 Worm   210 FLSKWRNFSHLLLKVRGDGRSYKIMLHSPLSMDFTWGDSFSHPLHTHGGPYWQYEKIPFSKFFHT 274

  Fly   230 SKGRVQDRQGAIPLNRVTHFGFSVAAKKGMDGPFGLEIDYVGLEYDPSHREEFAYEMYQTPKY 292
            ..||:||||..:.|...:..|  :.....:||.|.|||||:|:..|.:|.|:||||.|..|.:
 Worm   275 VAGRIQDRQYRVNLEDTSSIG--IVLMDRIDGDFRLEIDYIGVYNDTTHVEDFAYETYTLPVF 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CIA30NP_651718.1 CIA30 92..267 CDD:462515 69/175 (39%)
nuaf-1NP_506361.1 CIA30 139..310 CDD:462515 69/173 (40%)

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