Protein Alignment Pcd and AT1G29810

DIOPT Version :10

• Sequence 1: NP_477360.2
• Gene: Pcd / 43499
• FlyBaseID: FBgn0024841
• Length: 192
• Species: Drosophila melanogaster
• Sequence 2: NP_174274.2
• Gene: AT1G29810 / 839859
• AraportID: AT1G29810
• Length: 187
• Species: Arabidopsis thaliana
• Alignment Length: 177
• Identity: 48/177 - (27%)
• Similarity: 77/177 - (43%)
• Gaps: 37/177 - (20%)

  Fly    31 LFPTTATTATSRSLSQISVLY----------SPAAREAARAA-TGGSANLRRIHNTPTTEATATA 84
            ||..:.|...:.||  .:.||          |..:.::.|:: |||||:..|      |..:...
plant     9 LFSISRTQVPAASL--FNNLYRRHKRFVHWTSKMSTDSVRSSTTGGSASGAR------TFCSLAD 65

  Fly    85 ITAKK-----RKMVVRLNEQERAEKLQPLLDAGWTLVEGRDA--IFKQFVLKDFNQAFSFMTGVA 142
            ::.||     .|.:..:.||...:.||.:  |||.|....|.  :.:.:.:|.|.:...|...||
plant    66 LSTKKCVPCNAKDLRAMTEQSAQDLLQKV--AGWDLANDNDTLKLHRSWRVKSFTKGLDFFQRVA 128

  Fly   143 LLAEKINHHPE-----WFNCYNKVDVTLSTHDVGGLSSQDIRMATHL 184
            .:||...|||:     |    |.|.:.:.||.:|||:..|..:|..:
plant   129 DIAESEGHHPDLHLVGW----NNVKIEIWTHAIGGLTENDFILAAKI 171

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pcd	NP_477360.2	PCD_DCoH_subfamily_b	112..186	CDD:238456	24/80 (30%)
AT1G29810	NP_174274.2	PCD_DCoH_subfamily_a	96..174	CDD:238455	24/80 (30%)