DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pcd and AgaP_AGAP000439

DIOPT Version :9

Sequence 1:NP_477360.2 Gene:Pcd / 43499 FlyBaseID:FBgn0024841 Length:192 Species:Drosophila melanogaster
Sequence 2:XP_310658.4 Gene:AgaP_AGAP000439 / 1271804 VectorBaseID:AGAP000439 Length:194 Species:Anopheles gambiae


Alignment Length:190 Identity:77/190 - (40%)
Similarity:110/190 - (57%) Gaps:12/190 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VIKP--NCQKVANLLASSRRAGLFPTTATTATSRSLSQISV------LYSPAAREAARAATGGSA 67
            ::||  :.:.|.:.||..|..|:    |..|...|:.|..:      |........:.|.....:
Mosquito     9 ILKPQSSVRCVPSRLAIERLFGV----AAAAFRASVQQYDIRPLNLPLAGTVGTNTSNAGPVPKS 69

  Fly    68 NLRRIHNTPTTEATATAITAKKRKMVVRLNEQERAEKLQPLLDAGWTLVEGRDAIFKQFVLKDFN 132
            ...|:|.|......|:|...||:||:.:|.|.:|.|.|.||..||||:|:.||||:|:::..|||
Mosquito    70 PEYRVHRTVPYRTYASAAIIKKKKMLAKLTEAQRTELLTPLFAAGWTMVKDRDAIYKEYLFGDFN 134

  Fly   133 QAFSFMTGVALLAEKINHHPEWFNCYNKVDVTLSTHDVGGLSSQDIRMATHLETTANLLK 192
            :||.|||.|||.|:|::|||||||.||||.|||:|||..|||.:|:::|..|:..|.:.|
Mosquito   135 EAFGFMTRVALKADKMDHHPEWFNVYNKVQVTLATHDCAGLSERDVKLAQFLDQAAAVAK 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PcdNP_477360.2 PCD_DCoH_subfamily_b 112..186 CDD:238456 45/73 (62%)
AgaP_AGAP000439XP_310658.4 PCD_DCoH_subfamily_b 114..189 CDD:238456 45/74 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 121 1.000 Domainoid score I11265
eggNOG 1 0.900 - - E1_COG2154
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 140 1.000 Inparanoid score I6932
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002149
OrthoInspector 1 1.000 - - oto107787
Panther 1 1.100 - - LDO PTHR12599
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2565
TreeFam 1 0.960 - -
109.920

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