DRSC/TRiP Functional Genomics Resources

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Protein Alignment dmrt99B and dmrta1

DIOPT Version :9

Sequence 1:NP_524549.1 Gene:dmrt99B / 43495 FlyBaseID:FBgn0039683 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001072447.1 Gene:dmrta1 / 779901 XenbaseID:XB-GENE-984361 Length:448 Species:Xenopus tropicalis


Alignment Length:571 Identity:151/571 - (26%)
Similarity:206/571 - (36%) Gaps:247/571 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSLPSGVDMQNLMSQHPVLGALPPAFFLRAASER-------------------YQRTPKCARCRN 46
            :|:|..|.|       |.....||...||||:..                   |.||||||||||
 Frog    31 LSMPPNVPM-------PASFLRPPTLLLRAAAANATCSPRVTVSLDRGSGNALYPRTPKCARCRN 88

  Fly    47 HGVVSALKGHKRYCRWRDCVCAKCTLIAERQRVMAAQVALRRQQAQEENEARELGLLYTSVPGQQ 111
            ||||||||||||:||||||.||||||||||||||||||||||||||||.|.|::           
 Frog    89 HGVVSALKGHKRFCRWRDCSCAKCTLIAERQRVMAAQVALRRQQAQEECEVRDV----------- 142

  Fly   112 NGSDSATPTPHSPNHSGSGGSGSGGSGQNGVFHGGIPSPPSDGFEASSTPNHHQQSQQQQQAHHQ 176
                                                                             
 Frog   143 ----------------------------------------------------------------- 142

  Fly   177 QHLSHPHQQSQRFNGNESDTDGRTRSEHLSVGFSPTRTELDESPVSKRGAALSNETDQDTGSESG 241
            ||..:|        |.|.:|.| ||::.|.:                    :|.|.::|..||..
 Frog   143 QHFLYP--------GGERETPG-TRAQTLQI--------------------ISREENKDETSEKT 178

  Fly   242 -------------SPSSPRPKVAGLFNLTASLSPARTGPPSSPESDLDVDSAPDEATPENLSLKK 293
                         |.|.|:|..:|:.|....|..|  ||.:|.:.:....|..:|        :.
 Frog   179 EQTYERIPTSSIFSHSLPQPSPSGIVNACHILKSA--GPENSNKDECIQSSGSEE--------RS 233

  Fly   294 EDSQSPPNTPAENLHLLRSFSSSHAQGFLPYHHTQFLAAAG--LPAHHHPAAHSPHHQQQQQQQQ 356
            |.:.||           ||.||...:........:.|:|:.  :|.                   
 Frog   234 EGADSP-----------RSLSSCDLESGNECEWPKDLSASSSKIPV------------------- 268

  Fly   357 QQQNHLPQHHQQQQQQQQQQQRSPIDVLMRVFPNRRRSDVEQLMQRFRGDVLQAMECMLAG---- 417
                 :|           .:||.|:::|.:||||:::|.::.::|..:|||:||:|.:|.|    
 Frog   269 -----VP-----------SRQRDPLEILRKVFPNQKQSSLQSILQYCKGDVVQAIEFVLNGKEDK 317

  Fly   418 EDLGQTPPQVPPS-----------------PPFPMKSAFSPL--------------------VPP 445
            :|...|...:.|.                 ..|..|||||||                    .|.
 Frog   318 KDAKDTESSLGPDRNAFTKESALNLTGLGIGGFGTKSAFSPLHTNQSCVGSDSNIFSSRLGFTPL 382

  Fly   446 SVFGSPTHRYHPFMQAHAKRFLTAPY---AGTGY-LPGVLSAADIEQSESN 492
            .:..|.::|...|:..:....|..|:   .|..| .||:|......|.:.|
 Frog   383 RLAYSTSNRIPGFISPYLTSGLVPPFPFRPGLDYSFPGMLRDPSYYQHKDN 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dmrt99BNP_524549.1 DM 37..83 CDD:279137 43/45 (96%)
CUE_DMA_DMRTA1 378..415 CDD:270600 15/36 (42%)
dmrta1NP_001072447.1 DM 79..125 CDD:366283 43/45 (96%)
CUE_DMA_DMRTA1 272..311 CDD:270600 16/38 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 42 1.000 Domainoid score I12276
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 206 1.000 Inparanoid score I3617
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1573364at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm48796
Panther 1 1.100 - - O PTHR12322
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3693
SonicParanoid 1 1.000 - - X984
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.100

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