DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dmrt99B and Dmrtb1

DIOPT Version :9

Sequence 1:NP_524549.1 Gene:dmrt99B / 43495 FlyBaseID:FBgn0039683 Length:510 Species:Drosophila melanogaster
Sequence 2:XP_036020151.1 Gene:Dmrtb1 / 56296 MGIID:1927125 Length:397 Species:Mus musculus


Alignment Length:485 Identity:115/485 - (23%)
Similarity:154/485 - (31%) Gaps:176/485 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 RTPKCARCRNHGVVSALKGHKRYCRWRDCVCAKCTLIAERQRVMAAQVALRRQQAQEE------- 94
            |.|||:||||||.:..:|||...|||:.|:|.||.||.|||::||||..||.|.|:|:       
Mouse     3 RAPKCSRCRNHGYLVPVKGHTGKCRWKQCICDKCYLITERQKIMAAQKVLRTQAAEEQVATVGTQ 67

  Fly    95 --------NEARELGL------LYTSVPGQQNGSDSATPTPHSPNHSGSGGSGS---GGSGQNG- 141
                    ..|....|      |..:|||......:||.....|..:.|.|..:   |.||:.| 
Mouse    68 GPQLPPRAPAAAATALSSSICPLPRAVPGGVGPGPTATCFLERPPQAPSPGPSTFQLGPSGRPGP 132

  Fly   142 -VFHGGIPSPPSDGFEASST--PNHHQQSQQQQQAHHQQHL-------SHPHQQSQRFNGNESDT 196
             .|..| |..|....:.||.  |....|:.:.:..:..|||       ..|.:...|.       
Mouse   133 STFQPG-PGAPGGLRDRSSAWLPQLMPQAPRPELCYPDQHLPVRPVPVPGPVRPVPRL------- 189

  Fly   197 DGRTRSEHLSVGFSPTRTELDESPVSKRGAALSNETDQDTGSESGSPSSPRPKVAGLFNLTASLS 261
                  .....| .|:..:....|...|.||..::.:..||:..|...||               
Mouse   190 ------PFADYG-KPSLVQPTVPPACTRPAASGSKLESQTGAGVGKAPSP--------------- 232

  Fly   262 PARTGPPSSPESDLDVDSAPDEATPENLSLKKEDSQSPPNTPAENLHLLRSFSSSHAQGFLPYHH 326
                |.|...:||..|.:...|..|     .|:.....|.:|.::..|.....||          
Mouse   233 ----GHPLRFKSDHVVGAGNPEREP-----FKQCPACVPVSPYQSFPLSEGQDSS---------- 278

  Fly   327 TQFLAAAGLPAHHHPAAHSPHHQQQQQQQQQQQNHL---PQHHQQQQQQQQQQQRSPIDVLMRVF 388
                :|.|:|                  ||:...|:   |.|......:..:.            
Mouse   279 ----SALGVP------------------QQRGFRHVSCSPYHRSGLVSEPARD------------ 309

  Fly   389 PNRRRSDVEQLMQRFRGDVLQAMECMLAGEDLGQTPPQVPPSPPFPMKSAFSPLVPPSVFGSPTH 453
                               ||...|        ..||..||.||.|:     |..||        
Mouse   310 -------------------LQPTYC--------SPPPPPPPPPPPPL-----PAPPP-------- 334

  Fly   454 RYHPFMQAHAKRFLTAPYAGTGYLPGVLSA 483
                  |.....||.         ||.|||
Mouse   335 ------QPQQPHFLP---------PGYLSA 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dmrt99BNP_524549.1 DM 37..83 CDD:279137 27/45 (60%)
CUE_DMA_DMRTA1 378..415 CDD:270600 3/36 (8%)
Dmrtb1XP_036020151.1 DM 3..49 CDD:395608 27/45 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3815
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003936
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12322
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

Return to query results.
Submit another query.