DRSC/TRiP Functional Genomics Resources

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Protein Alignment dmrt99B and dmrt3a

DIOPT Version :9

Sequence 1:NP_524549.1 Gene:dmrt99B / 43495 FlyBaseID:FBgn0039683 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001005779.2 Gene:dmrt3a / 450035 ZFINID:ZDB-GENE-021220-3 Length:448 Species:Danio rerio


Alignment Length:477 Identity:122/477 - (25%)
Similarity:168/477 - (35%) Gaps:199/477 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 QRTPKCARCRNHGVVSALKGHKRYCRWRDCVCAKCTLIAERQRVMAAQVALRRQQAQEENEA--- 97
            ||||||||||||||:|.|||||||||::||.|.||.||.|||||||||||||||||.|..|:   
Zfish    23 QRTPKCARCRNHGVLSWLKGHKRYCRFKDCTCEKCILIIERQRVMAAQVALRRQQANESLESLIP 87

  Fly    98 ---REL-GLLYTSVPGQQNGSDSA----------TPTPHSPNHSGSGGSGSGGSGQNGVFHGGIP 148
               |.| |:..:|  |:|:.:..|          |.||.:|.......||....|:|    ||..
Zfish    88 ESLRALPGITVSS--GEQSANPRASDIDLRWNTETGTPKTPQDLSDELSGEQSGGEN----GGSD 146

  Fly   149 SPPSDGFEASSTPNHHQQSQQQQQAHHQQHLSHPHQQSQRFNGNESDTDGRTRSEHLSVGFSPTR 213
            ..|    ||.|:|..                |.|:                         ...|.
Zfish   147 REP----EAVSSPEE----------------SKPN-------------------------LCCTP 166

  Fly   214 TELDESPVSKRGAALSNETDQDTGSESGSPSSPRPKVAGLFNLTASLSPARTGPPSSPESDLDVD 278
            ...|.||          :.::.....|.|.|.|.||                             
Zfish   167 DTSDPSP----------QLEESRFGLSKSCSDPEPK----------------------------- 192

  Fly   279 SAPDEATPENLSLKKEDSQSPPNTPAENLHLLRSFSSSHAQGFLPYHHTQFLAAAGLPAHHHPAA 343
                             |.:|..:|..|| |:...|.|.:   ||:                   
Zfish   193 -----------------SDNPKYSPEPNL-LIEGLSGSVS---LPF------------------- 217

  Fly   344 HSPHHQQQQQQQQQQQNHLPQHHQQQQQQQQQQQRSPIDVLMRVFPNRRRSDVEQLMQRFRGDVL 408
                                         ..:..|.|::||.::||..:.:.:|.:::...||::
Zfish   218 -----------------------------SLRANRPPLEVLKKIFPAHKPAVLELILKGCGGDLV 253

  Fly   409 QAMECMLAGEDLGQTPPQVPPSPPFPMKSAFSPLVPPS---VFGSPTHRY----------HPFMQ 460
            .|:|.:|:.... ..|.::       :..:...||.||   :|..|...|          ..|..
Zfish   254 GAIEILLSSRST-MKPEKI-------LSESSDALVLPSNGHLFEHPLSSYPVSSSKWSVGSAFRV 310

  Fly   461 AHAKRFLTAPYAGTGYLPGVLS 482
            ..:.||  :..:..|.:||.||
Zfish   311 PDSLRF--SSESSGGVVPGPLS 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dmrt99BNP_524549.1 DM 37..83 CDD:279137 37/45 (82%)
CUE_DMA_DMRTA1 378..415 CDD:270600 11/36 (31%)
dmrt3aNP_001005779.2 DM 24..70 CDD:279137 37/45 (82%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 98..203 34/211 (16%)
CUE_DMA_DMRTA3 221..263 CDD:270602 12/41 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 424..448
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3815
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 146 1.000 Inparanoid score I4409
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12322
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3693
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.990

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