DRSC/TRiP Functional Genomics Resources

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Protein Alignment dmrt99B and Dmrta2

DIOPT Version :9

Sequence 1:NP_524549.1 Gene:dmrt99B / 43495 FlyBaseID:FBgn0039683 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_758500.2 Gene:Dmrta2 / 242620 MGIID:2653629 Length:531 Species:Mus musculus


Alignment Length:595 Identity:172/595 - (28%)
Similarity:216/595 - (36%) Gaps:232/595 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 VLGAL--PPAFFLRAASERYQRTPKCARCRNHGVVSALKGHKRYCRWRDCVCAKCTLIAERQRVM 80
            |.|.|  .|...|||| |:|.||||||||||||||||||||||||||:||:||||||||||||||
Mouse    45 VAGGLLRAPPLLLRAA-EKYPRTPKCARCRNHGVVSALKGHKRYCRWKDCLCAKCTLIAERQRVM 108

  Fly    81 AAQVALRRQQAQEENEARELGLLYTSVPGQQNGSDSATPTPHSPNHSGSGGSGSGGSGQNGVFHG 145
            ||||||||||||||||||||.|||.:                        ..|...:..||:.  
Mouse   109 AAQVALRRQQAQEENEARELQLLYGT------------------------AEGLALAAANGII-- 147

  Fly   146 GIPSPPSDGFEASSTPNHHQQSQQQQQAHHQQHLSHPHQQSQRFNGNESDTDGRTRSEHLSVGFS 210
                ||...:|..                                |:...|||.....       
Mouse   148 ----PPRPAYEVF--------------------------------GSVCATDGGGPGA------- 169

  Fly   211 PTRTELDESPVSKRGAALSNETD-------QDTGSESGSPSSPRPKVAGLFNLTASLSPARTGPP 268
                   .:|....|.|...|..       ..|..::|.|.||:|                  ||
Mouse   170 -------GAPAGSAGGAGGAEAKLQKFDLFPKTLLQAGRPDSPQP------------------PP 209

  Fly   269 SSPESDLDVDSAPDEATPE---NLSLKKEDSQSPPNTPAENLHLLRSFSSSHAQGFLPYHHTQFL 330
            ..|.|....||.|..::||   ....:..|.:|...:|     |.|  :|..|.|..|    ...
Mouse   210 GKPLSPDGADSGPRTSSPEVRPGSGSENGDGESFSGSP-----LAR--ASKEAGGSCP----GSA 263

  Fly   331 AAAGLPAHHHPAAHSPHHQQQQQQQQQQQNHL-----------PQHHQQQQQQQQQQQRSPIDVL 384
            .|.|......|.:.||...:...:..:::...           |            :||:|:|:|
Mouse   264 GAGGGGEEDSPGSSSPLGSESGSEADKEEAEAAPTPGLGGGPGP------------RQRTPLDIL 316

  Fly   385 MRVFPNRRRSDVEQLMQRFRGDVLQAMECML------------------------AGEDLG---- 421
            .||||..||..:|.::|...|||:||:|.:|                        |.||..    
Mouse   317 TRVFPGHRRGVLELVLQGCGGDVVQAIEQVLNHHRGGLAAGLGPAAPLEKAAVSAAVEDAWPGRV 381

  Fly   422 --------------QTPPQVPP----------SP----PFPMKSAFSPLVP-PSVFG-------- 449
                          ||.|..||          :|    ....:||||||.| .|.||        
Mouse   382 EAAAAGGAGLPAPLQTGPTAPPHHRPLLAGAMTPGALGSLSSRSAFSPLQPNASHFGADAGAYPL 446

  Fly   450 ------SPTHRYHPFMQAHAKRF-LTAPYAGTGYLP-------------------GVLSAADIEQ 488
                  ||....:....||::.. ..|||:..|.:|                   ...:||.:.:
Mouse   447 GAPLGLSPLRLAYSAAAAHSRGLAFMAPYSTAGLVPTLGFRPPMDYAFSDLMRDRSAAAAAAVHK 511

  Fly   489 SESNGAGGIG 498
            ....|.|..|
Mouse   512 EPGYGGGLYG 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dmrt99BNP_524549.1 DM 37..83 CDD:279137 43/45 (96%)
CUE_DMA_DMRTA1 378..415 CDD:270600 18/36 (50%)
Dmrta2NP_758500.2 DM 65..111 CDD:366283 43/45 (96%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 197..312 31/155 (20%)
CUE_DMA_DMRTA2 308..349 CDD:270601 20/40 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 104 1.000 Domainoid score I6689
eggNOG 1 0.900 - - E1_KOG3815
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 198 1.000 Inparanoid score I3790
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1573364at2759
OrthoFinder 1 1.000 - - FOG0003936
OrthoInspector 1 1.000 - - otm43630
orthoMCL 1 0.900 - - OOG6_108101
Panther 1 1.100 - - O PTHR12322
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3693
SonicParanoid 1 1.000 - - X984
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.950

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