DRSC/TRiP Functional Genomics Resources

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Protein Alignment dmrt99B and dmd-9

DIOPT Version :10

Sequence 1:NP_524549.1 Gene:dmrt99B / 43495 FlyBaseID:FBgn0039683 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_500305.1 Gene:dmd-9 / 190512 WormBaseID:WBGene00022060 Length:254 Species:Caenorhabditis elegans


Alignment Length:303 Identity:52/303 - (17%)
Similarity:88/303 - (29%) Gaps:120/303 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 AASERYQRTPKCARCRNHGVVSALKGHKRYCRWRDCVCAKCTLIAERQRVMAAQVALRRQQAQEE 94
            ||.::..:...|.:|..||..:.||||...|.::||.|..|..:..    |.|...:||.:.::.
 Worm    20 AAQKKAMKKLTCRKCEGHGTYAILKGHAGVCPYKDCSCGTCASVMS----MRANALIRRFRHRQP 80

  Fly    95 NEARELGLLYTSVPGQQNGSDSATPTPHSPNHS---GSGGSGSGGSGQNGVFHGGIPSPPSDGFE 156
            :::    :........:||:......|.:...:   ..|...:..|.:||               
 Worm    81 DQS----MAVVKALRSKNGNMRLRIVPRNDEETVVENDGTLVTYSSDKNG--------------- 126

  Fly   157 ASSTPNHHQQSQQQQQAHHQQHLSHPHQQSQRFNGNESDTDGRTRSEHLSVGFSPTRTELDESPV 221
                              ||.:                                        :..
 Worm   127 ------------------HQTY----------------------------------------TTT 133

  Fly   222 SKRGAALSNETDQDTGSESGSPSSPRPKVAGLFNLTASLSPARTGPPSSPESDLD--VDSA---- 280
            ::|.:.::|.||......|..||:..       |.|.|.||    |...|..|:|  ||..    
 Worm   134 TRRSSIMTNSTDDRDSVVSTPPSTTN-------NSTPSGSP----PLLVPYGDVDIAVDPVGAAN 187

  Fly   281 -------------------PDEATPENLSLKKEDSQSPPNTPA 304
                               |...:|..:|...:.:|.|...|:
 Worm   188 WEQITNIVRTTMLNQILMNPTNVSPALISFLLQPTQQPSFEPS 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dmrt99BNP_524549.1 DM 37..83 CDD:459924 14/45 (31%)
CUE_DMA_DMRTA1 378..415 CDD:270600
dmd-9NP_500305.1 DM 27..69 CDD:459924 14/45 (31%)
Blue background indicates that the domain is not in the aligned region.

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