DRSC/TRiP Functional Genomics Resources

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Protein Alignment dmrt99B and dmd-6

DIOPT Version :9

Sequence 1:NP_524549.1 Gene:dmrt99B / 43495 FlyBaseID:FBgn0039683 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001370045.1 Gene:dmd-6 / 178392 WormBaseID:WBGene00007058 Length:470 Species:Caenorhabditis elegans


Alignment Length:494 Identity:97/494 - (19%)
Similarity:164/494 - (33%) Gaps:152/494 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 CARCRNHGVVSALKGHKRYCRWRDCVCAKCTLI----------AERQRV-MAAQVALRRQQAQ-- 92
            |.:|..||....||.|...|.:..|.|..|..:          ..:::: :||.:..:|...:  
 Worm    45 CRKCEGHGEKVILKNHSPQCPYILCNCKSCEKLNYKRLKSFNKRNKEKIELAAALNAKRHAPESG 109

  Fly    93 -----EENEARELGLL-YTSVPGQQNGSDSATPTPHSPNHSGSGGSGSGGSGQNGVFHGGIPSPP 151
                 ||..:|..... .||.|...:.:.:::.||.:.::|                    ..|.
 Worm   110 SSVDDEEGFSRRSSFCSKTSTPDMDSETRTSSTTPITRSNS--------------------TMPT 154

  Fly   152 SDGFEASSTPNHHQ----------QSQQQQQAHHQQHLSHPHQQSQRFNGNESDTDGRTRSEHLS 206
            ::|.|..|....|.          :...:::...::.|:.|    :.|..:.|....|.|: |..
 Worm   155 ANGLEGRSGSLGHMTVMSYDIWKAKCASERKRLEEERLTKP----ELFTRSPSPGPMRKRA-HTF 214

  Fly   207 VGFSPT------------RTELDES--------PVSKRGAALSNETDQD----TGSESGSP--SS 245
            |. .||            :..|||.        |.........||.|:|    |..:...|  .:
 Worm   215 VA-PPTIHTPDIPVVAAKKMSLDEKVKGKFITLPTIPAMRIFVNEEDEDVKPVTQMQLAQPIALT 278

  Fly   246 PRPKVAGLFNLTASLSPARTGPP------SSPESDLDVDSAPDEATPENLSLKKE---DSQSPPN 301
            |.|::    :|.::|:......|      .:|.|.||:.|......|..:|....   ..|:|..
 Worm   279 PSPQM----SLASTLAQIPMSTPVCMPSMITPTSFLDIPSTSSPMLPFQISTTTSPMLQRQTPIL 339

  Fly   302 TPAENLHLLRSFSSSHAQGFLPYHHTQFLAAAGLPAHHHPAAHSPHHQQQQQQQQQQQNHLPQHH 366
            ||             ....|.|         .|:.....||.       ......|:.:....|.
 Worm   340 TP-------------QMSPFKP---------VGVATPQPPAL-------SNLSAGQELSSFILHS 375

  Fly   367 QQQQQQQQQQQRSPIDVLMRVFPNRRRSDVE------QLMQRFRGDVLQAMECMLAGEDLGQTP- 424
            ...|.||.||:.:     .::.|....|::|      :|.|...||:::     |:|..|...| 
 Worm   376 VVLQAQQAQQKTA-----QQLIPTSMPSELESTLSLLRLQQSSLGDLIK-----LSGIQLPTLPT 430

  Fly   425 ------PQVPPSP------PFPMKSAFSPLVPPSVFGSP 451
                  ||:|..|      |..:..:|.|.:.|::|.:|
 Worm   431 TQPMLTPQMPTLPMMQKALPTVLPGSFQPFLQPTLFTNP 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dmrt99BNP_524549.1 DM 37..83 CDD:279137 12/52 (23%)
CUE_DMA_DMRTA1 378..415 CDD:270600 7/42 (17%)
dmd-6NP_001370045.1 DM 41..94 CDD:214606 11/48 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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