DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment dmrt99B and mab-3

DIOPT Version :9

Sequence 1:	NP_524549.1	Gene:	dmrt99B / 43495	FlyBaseID:	FBgn0039683	Length:	510	Species:	Drosophila melanogaster
Sequence 2:	NP_001022464.1	Gene:	mab-3 / 174533	WormBaseID:	WBGene00003100	Length:	290	Species:	Caenorhabditis elegans

Alignment Length:	130	Identity:	44/130 - (33%)
Similarity:	67/130 - (51%)	Gaps:	20/130 - (15%)

- Green bases have known domain annotations that are detailed below.

  Fly     9 MQNLMSQHPVLGALPPAFFLRAASERYQRTPKCARCRNHGVVSALKGHKR-YCRWRDCVCAKCTL 72
            :.||:|:..:  ...||  .:....:..|.|.||||..|||:..|:|||| .|::..|.|..|||
Worm    66 LNNLLSKKKI--HCTPA--TQTRDGKRVRDPHCARCSAHGVLVPLRGHKRTMCQFVTCECTLCTL 126

  Fly    73 IAERQRVMAAQVALRRQQAQEENEARELG--------------LLYTSVPGQQNGSDSATPTPHS 123
            :..|:.:||||:.|||.| |:..:.:|..              ::.|:..||:....||:|:|.|
Worm   127 VEHRRNLMAAQIKLRRSQ-QKSRDGKEPKRNSRRKSKDMDMEMMVVTATDGQKIIGTSASPSPSS 190

Fly 124 123
Worm 191 190

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
dmrt99B	NP_524549.1	DM	37..83	CDD:279137	23/46 (50%)
dmrt99B	NP_524549.1	CUE_DMA_DMRTA1	378..415	CDD:270600
mab-3	NP_001022464.1	DM	24..77	CDD:214606	3/12 (25%)
mab-3	NP_001022464.1	DM	90..144	CDD:214606	28/53 (53%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910