DRSC/TRiP Functional Genomics Resources

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Protein Alignment dmrt99B and mab-3

DIOPT Version :10

Sequence 1:NP_524549.1 Gene:dmrt99B / 43495 FlyBaseID:FBgn0039683 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001022464.1 Gene:mab-3 / 174533 WormBaseID:WBGene00003100 Length:290 Species:Caenorhabditis elegans


Alignment Length:130 Identity:44/130 - (33%)
Similarity:67/130 - (51%) Gaps:20/130 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 MQNLMSQHPVLGALPPAFFLRAASERYQRTPKCARCRNHGVVSALKGHKR-YCRWRDCVCAKCTL 72
            :.||:|:..:  ...||  .:....:..|.|.||||..|||:..|:|||| .|::..|.|..|||
 Worm    66 LNNLLSKKKI--HCTPA--TQTRDGKRVRDPHCARCSAHGVLVPLRGHKRTMCQFVTCECTLCTL 126

  Fly    73 IAERQRVMAAQVALRRQQAQEENEARELG--------------LLYTSVPGQQNGSDSATPTPHS 123
            :..|:.:||||:.|||.| |:..:.:|..              ::.|:..||:....||:|:|.|
 Worm   127 VEHRRNLMAAQIKLRRSQ-QKSRDGKEPKRNSRRKSKDMDMEMMVVTATDGQKIIGTSASPSPSS 190

  Fly   124  123
             Worm   191  190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dmrt99BNP_524549.1 DM 37..83 CDD:459924 23/46 (50%)
CUE_DMA_DMRTA1 378..415 CDD:270600
mab-3NP_001022464.1 DM 24..77 CDD:214606 3/12 (25%)
DM 90..144 CDD:214606 28/53 (53%)
Blue background indicates that the domain is not in the aligned region.

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