DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dmrt99B and dmrta2

DIOPT Version :9

Sequence 1:NP_524549.1 Gene:dmrt99B / 43495 FlyBaseID:FBgn0039683 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001096543.1 Gene:dmrta2 / 100125187 XenbaseID:XB-GENE-997963 Length:437 Species:Xenopus tropicalis


Alignment Length:508 Identity:159/508 - (31%)
Similarity:210/508 - (41%) Gaps:186/508 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 VLGAL--PPAFFLRAASERYQRTPKCARCRNHGVVSALKGHKRYCRWRDCVCAKCTLIAERQRVM 80
            |.|.|  .|...|||| |:|.||||||||||||||||||||||||||:||:||||||||||||||
 Frog    25 VAGTLLRGPQLLLRAA-EKYPRTPKCARCRNHGVVSALKGHKRYCRWKDCMCAKCTLIAERQRVM 88

  Fly    81 AAQVALRRQQAQEENEARELGLLYTSVPGQQNGSDSATPTPHSPNHSGSGGSGSGGSGQNGVFHG 145
            ||||||||||||||||||||.|||.:                        ..|...:..||:.  
 Frog    89 AAQVALRRQQAQEENEARELQLLYGT------------------------AEGLALAAANGII-- 127

  Fly   146 GIPSPPSDGFEASSTPNHHQQSQQQQQAHHQQHLSHPHQQSQRFNG--NESDTDGRTRSEHLSVG 208
                ||...:|.                               |..  .|..||.:.:...|   
 Frog   128 ----PPRPAYEV-------------------------------FGSVCTEGGTDSKIQKFDL--- 154

  Fly   209 FSPTRTELDESPVSKRGAALSNETDQDTGSESGSPSSPRPKVAGLFNLTASLSPARTGPPSSPES 273
                                             .|.|..|:     ::|..||..  |.|.||:|
 Frog   155 ---------------------------------FPKSLIPR-----SVTPQLSSG--GKPVSPDS 179

  Fly   274 DLDVDSAPDEATPENLSLKKEDSQSPPNTPAEN---LHLLRS-FSSSHAQGFLPYHHTQFLAAAG 334
            :....|||..::||          :.|.:.:||   ..||.| .|.:..:|              
 Frog   180 ESVSGSAPGASSPE----------ARPGSGSENGDGESLLSSPISKALKEG-------------- 220

  Fly   335 LPAHHHPAAHSPHHQQQQQQQQQQQNHLPQHHQQQQQQQQQQQRSPIDVLMRVFPNRRRSDVEQL 399
               ...|::.||...:.....::.:       |........:||:|||:|.||||.::||.:|.:
 Frog   221 ---EESPSSISPLGSESGSDAEKDE-------QDPSSSSSARQRTPIDILTRVFPAQKRSVLELV 275

  Fly   400 MQRFRGDVLQAMECML--AGEDLGQTP-------PQVPPSPPF---PM--------------KSA 438
            :|...|||:||:|.:|  .|:|..:..       |.:.||...   |:              :||
 Frog   276 LQGCGGDVVQAIEQILNNRGQDKSEETWSRDGALPSIQPSVSSTHRPLIAGALTPAIGTLGSRSA 340

  Fly   439 FSPLVPPSV-FGSPTHRY--------HPF---MQAHAKRF-LTAPYAGTGYLP 478
            ||||.|... ||:..:.|        :|.   ..||::.. ..|||:..|::|
 Frog   341 FSPLQPNGAHFGTEANAYQLGGHLGLNPLRLAYSAHSRGLAFMAPYSTAGFMP 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dmrt99BNP_524549.1 DM 37..83 CDD:279137 43/45 (96%)
CUE_DMA_DMRTA1 378..415 CDD:270600 19/36 (53%)
dmrta2NP_001096543.1 DM 45..91 CDD:366283 43/45 (96%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..254 25/126 (20%)
CUE_DMA_DMRTA2 252..293 CDD:270601 21/40 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 297..317 4/19 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 104 1.000 Domainoid score I6670
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 206 1.000 Inparanoid score I3617
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1573364at2759
OrthoFinder 1 1.000 - - FOG0003936
OrthoInspector 1 1.000 - - otm48796
Panther 1 1.100 - - O PTHR12322
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3693
SonicParanoid 1 1.000 - - X984
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.100

Return to query results.
Submit another query.