DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Obp99c and Obp47a

DIOPT Version :9

Sequence 1:NP_651711.1 Gene:Obp99c / 43494 FlyBaseID:FBgn0039682 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_610632.1 Gene:Obp47a / 36162 FlyBaseID:FBgn0033573 Length:165 Species:Drosophila melanogaster


Alignment Length:130 Identity:30/130 - (23%)
Similarity:48/130 - (36%) Gaps:42/130 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DWTPKTGEEIRKIRVDCLKENPLSNDQISQLKNLIF--PNEPDVRQYLTCSAIKLGIFCDQQGYH 81
            |.:|||..| ..||: |..:..:|..::::|:...|  |:| .|:.:..|...::|:..|  |..
  Fly    34 DESPKTITE-EMIRL-CGDQTDISLRELNKLQREDFSDPSE-SVQCFTHCLYEQMGLMHD--GVF 93

  Fly    82 ADRLAKQFKMDLSEEEALQIAQSCVDDNAQKNPTDVW----------------AFRGHQCMMASK 130
            .:|.......|:|.                   ||.|                |:|.|||....|
  Fly    94 VERDLFGLLSDVSN-------------------TDYWPERQCHAIRGNNKCETAYRIHQCQQQLK 139

  Fly   131  130
              Fly   140  139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp99cNP_651711.1 PBP_GOBP 17..128 CDD:279703 29/126 (23%)
Obp47aNP_610632.1 PBP_GOBP 48..132 CDD:279703 19/105 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.