DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gycalpha99B and gcy-11

DIOPT Version :9

Sequence 1:NP_477088.2 Gene:Gycalpha99B / 43493 FlyBaseID:FBgn0013972 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_001359843.1 Gene:gcy-11 / 181745 WormBaseID:WBGene00001537 Length:1168 Species:Caenorhabditis elegans


Alignment Length:550 Identity:155/550 - (28%)
Similarity:235/550 - (42%) Gaps:95/550 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 DVLKLQEEDVTDTGFVCAGEGELIFTSERPVIAWLLLGSLKALTRMLYKVDVNI----KIEPVEG 213
            |:|..:..:..:..|....|.:||||...       .|..|:|..:|...|:.:    |:..||.
 Worm   666 DLLMNETHENLNRFFGLINESDLIFTIHS-------YGPRKSLMDLLRNDDLRLDRMFKVSFVED 723

  Fly   214 DARRYRYLFSLVKDNSQTMLMGRPTSVSKTIPETVQRSNSSNASDLQMNSSS----------FCK 268
            ..:..::|    .:.|:....|...| |..|.:...|...||....|:....          |..
 Worm   724 VVKGLQFL----HEGSKIGYHGNLKS-SNCIVDAYWRIKLSNYGMEQIRVEEPESKPDDLLWFAP 783

  Fly   269 MFPWHFIMNEQLELVQLGRG--FS---KLYKPY--MADFGCQATTYFD----FKRPKGLTMKFRD 322
            .....:.:...|..::|.:.  :|   .||:.|  ...||.......:    .|.|.|..:...|
 Worm   784 EIIRRYAVKHDLSKLELAKADIYSLAIVLYEIYGRQGPFGDDLLDSDEIIEQLKFPDGGALTRPD 848

  Fly   323 IVRRTYTPFLIGLNNPPGAVDFPAIGLEIKGQMVHCPESNSLLFIGSPFLDGLDGLTCNGLFISD 387
            |...|..|:.:........|:.||....||       :...||   .|...||.|          
 Worm   849 IHLITKAPYPLASVVEKCWVEDPASRPSIK-------KVRELL---KPLSKGLKG---------- 893

  Fly   388 IPLHDATREVILVGEQARAQDGLRRRMDKIKNSIE----EANSAVTKERKKNVSLLHLIFPAEIA 448
                             ...|.:...:|:.:|::|    |....:..|||:|.|||..:.|..:|
 Worm   894 -----------------NIADNIMNLLDRYRNNLEDVIKERTEQLEDERKRNESLLLQLLPKSVA 941

  Fly   449 EKLWLGSSIDAKTYPDVTILFSDIVGFTSICSRATPFMVISMLEGLYKDFDEFCDFFDVYKVETI 513
            ..|..|..:||:.|..|:|.||||||||::.|::||..|::||..||.:||...|.||.||||||
 Worm   942 NSLKNGQPVDAEFYDSVSIYFSDIVGFTALSSKSTPLQVVNMLNNLYTNFDTIIDKFDCYKVETI 1006

  Fly   514 GDAYCVASGLHRASIY-DAHKVAWMALKMIDACSKH-ITH-DGEQIKMRIGLHTGTVLAGVVGRK 575
            ||||...|||...:.| .|.:||..:|:::|:.... ::| ..|::::|||.|||.|:.||||.:
 Worm  1007 GDAYMFVSGLPEVNSYLHAGEVASASLELLDSIKTFTVSHCPDEKLRLRIGNHTGPVVTGVVGIR 1071

  Fly   576 MPRYCLFGHSVTIANKFESGSEALKINVSPTTKDWLTKHEGFEFELQPRDPSFLPKEFPNPGGTE 640
            ||||||||.:|.|||..||..|.::|.:|....:.:.|..|:..|  .|:...|..:.     ..
 Worm  1072 MPRYCLFGDTVIIANMMESSGEPMRIQISSDAYELILKCGGYVTE--QREKIVLKNKL-----EV 1129

  Fly   641 TCYFLESF-------RNPALDSELPLVEHI 663
            ..|::..:       |..|...:.|.:||:
 Worm  1130 MTYWMNDYSKDARLARLVAHQEKFPHLEHL 1159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gycalpha99BNP_477088.2 HNOB 76..208 CDD:285002 13/58 (22%)
HNOBA 259..451 CDD:285003 42/216 (19%)
CYCc 430..619 CDD:214485 88/191 (46%)
Guanylate_cyc 457..647 CDD:278633 81/192 (42%)
gcy-11NP_001359843.1 Periplasmic_Binding_Protein_type1 <234..452 CDD:385651
PKc_like 640..890 CDD:389743 50/245 (20%)
CYCc 923..1116 CDD:214485 88/192 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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