back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Gycalpha99B and gcy-7

DIOPT Version :9

Sequence 1:	NP_477088.2	Gene:	Gycalpha99B / 43493	FlyBaseID:	FBgn0013972	Length:	676	Species:	Drosophila melanogaster
Sequence 2:	NP_001360539.1	Gene:	gcy-7 / 179222	WormBaseID:	WBGene00001534	Length:	1117	Species:	Caenorhabditis elegans

Alignment Length:	236	Identity:	94/236 - (39%)
Similarity:	135/236 - (57%)	Gaps:	17/236 - (7%)

- Green bases have known domain annotations that are detailed below.

  Fly   399 LVGEQARAQDGLRRRMDKIKN-------SIEEANSAVTK----ERKKNVSLLHLIFPAEIAEKLW 452
            |.|..:...|.|   ||.:.|       |:||..|..||    |:||:..||:.:.|..:|:||.
Worm   821 LRGMNSSRNDNL---MDHVFNMLESYASSLEEEVSERTKELVEEKKKSDVLLYRMLPKTVADKLK 882

  Fly   453 LGSSIDAKTYPDVTILFSDIVGFTSICSRATPFMVISMLEGLYKDFDEFCDFFDVYKVETIGDAY 517
            ||.:::.:|:..|||.|||:|.||::.|:.||..|:::|..||..||...:..||||||||||.|
Worm   883 LGQTVEPETFEQVTIFFSDVVQFTTLASKCTPLQVVNLLNDLYTIFDGIIEKHDVYKVETIGDGY 947

  Fly   518 CVASGL-HRASIYDAHKVAWMALKMIDACS-KHITH-DGEQIKMRIGLHTGTVLAGVVGRKMPRY 579
            ...||| ||.......::|.|:|..:.:.. ..:.| ..|:|.:|||::.|:|:|||||..|||:
Worm   948 LCVSGLPHRNGNEHVRQIALMSLAFLSSLQFFRVPHLPSERINLRIGMNCGSVVAGVVGLTMPRF 1012

  Fly   580 CLFGHSVTIANKFESGSEALKINVSPTTKDWLTKHEGFEFE 620
            ||||.:|..|::.||..:..||:||......|....||:.|
Worm  1013 CLFGDAVNTASRMESNGKPGKIHVSAEANRMLHLVGGFDTE 1053

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.