DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7582 and Tmem86a

DIOPT Version :9

Sequence 1:NP_651710.1 Gene:CG7582 / 43492 FlyBaseID:FBgn0039681 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_001128488.1 Gene:Tmem86a / 308602 RGDID:1305749 Length:240 Species:Rattus norvegicus


Alignment Length:238 Identity:80/238 - (33%)
Similarity:118/238 - (49%) Gaps:26/238 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KSQGPKLVPFLVTIVLYFSLVRKDPQGELWTTVLKCLPIFALVFYVVAKGISLKKEYRRSLWILL 73
            ||:|||||||.....:||.|.........::.::||||||.|..:::|.|......:..:..|..
  Rat     9 KSEGPKLVPFFKATCVYFVLWLPSSSPSWFSALIKCLPIFCLWLFLLAHGFRFLLAHPSASLIFA 73

  Fly    74 GLVFSSGGDALL---NINLFPFGMISFGVAHVFYISAFGWKPIKWFIGLLLYVAVSLCKFTGHYI 135
            |||||:.|||.|   :...|..|::.|.|||:.|..|||.:|:....||::.|...||       
  Rat    74 GLVFSAVGDAFLIWQDSGYFEHGLLMFAVAHILYALAFGMRPLALRTGLVIGVLSGLC------- 131

  Fly   136 RIPYLEYLKPPVVYFVHTKLDEILIIGVPIYCFLITTMLWRSLA---RAVDSRNFLAVFCAIGAI 197
                        ...::.:|.......|.:|..||:.|.||::|   ....:..:..:...:||:
  Rat   132 ------------YALLYPRLSGAFTYLVGVYVTLISFMGWRAMAGLRLGGAAWRWTELAAGVGAL 184

  Fly   198 LFVISDALIAVTMFVGVPLPCARLQIMITYYAAQFAIALSTAD 240
            ||::||..||:..|. .|:|.:|..||.||||||..||||..:
  Rat   185 LFILSDLTIALNKFC-FPVPYSRALIMSTYYAAQMFIALSAVE 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7582NP_651710.1 YhhN 38..237 CDD:285222 66/204 (32%)
Tmem86aNP_001128488.1 YhhN 37..224 CDD:285222 67/206 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341046
Domainoid 1 1.000 99 1.000 Domainoid score I6935
eggNOG 1 0.900 - - E1_KOG4804
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41679
Inparanoid 1 1.050 120 1.000 Inparanoid score I4679
OMA 1 1.010 - - QHG48600
OrthoDB 1 1.010 - - D1516092at2759
OrthoFinder 1 1.000 - - FOG0003055
OrthoInspector 1 1.000 - - otm45869
orthoMCL 1 0.900 - - OOG6_106299
Panther 1 1.100 - - O PTHR31885
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3969
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

Return to query results.
Submit another query.