DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cap-D2 and AT3G57060

DIOPT Version :9

Sequence 1:NP_651709.1 Gene:Cap-D2 / 43491 FlyBaseID:FBgn0039680 Length:1380 Species:Drosophila melanogaster
Sequence 2:NP_001190114.1 Gene:AT3G57060 / 824873 AraportID:AT3G57060 Length:1415 Species:Arabidopsis thaliana


Alignment Length:1302 Identity:328/1302 - (25%)
Similarity:588/1302 - (45%) Gaps:214/1302 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 FDLYYSIIEARGSDGASAQ-NLMRSFDLLYLTVEKLFQDLQPLL----TASEPMSNQQRN----- 114
            ||..||::.:..|...|.: ||          ||.|..:|..||    :.|..:.:|:.:     
plant    65 FDRVYSLVRSFFSLPPSCKCNL----------VESLRSNLSVLLPNVDSISRSVQDQEDDVPIID 119

  Fly   115 ---SYLNLTKMTLFLQVSTVKKINNSVQQAMRDQQLNVQKKRAKPSEGLEQFPNWEVKRGKFLVQ 176
               |:.|..|:..|..::.|....:.:...    :......|.:..:.::.: |||.:||:.|..
plant   120 RITSHRNALKIYTFFLLTVVMNEESHISSV----ETTKVAARGRKKQIIQSW-NWEPQRGRMLNL 179

  Fly   177 LFNVLQCPLEKLWSPPVAEEDFINLLCDPCYRTIELLPLRMDNKHVFDTIFQILGTSIKRFNQAM 241
            :.|.|:..|..|:.....:|::::.:....:...|...:..| ....|.:.:|:|.|..:::..:
plant   180 IANSLEINLSLLFGSSDLDENYLSFIVKNSFTLFENATILKD-AETKDALCRIIGASATKYHYIV 243

  Fly   242 TFPVRILQILRGTEHAAHSVAAGILLLHEEYGISSVFSILIKSIVDALRMDS----SDSSVSKHF 302
            .....|:.::...:.|...:|..:.....:|...::...:|:   |..|.|.    .|::.:.:.
plant   244 QSCASIMHLIHKYDFAVVHIADAVARAESKYSDGTLAVTIIR---DIGRTDPKAYVKDTAGADNV 305

  Fly   303 SNFLAEFSNIAPSL-------IVPHLEKLAEDLLDCQSHTLRNCVLQIIG-------DTVVSELT 353
            ..||.|.::..|.|       :|||        ...:|:.:||.::.::|       :.|..:::
plant   306 GRFLVELADRLPKLMSTNVGVLVPH--------FGGESYKIRNALVGVLGKLVAKAFNDVEGDMS 362

  Fly   354 SEDLSEELKEVRNEFLEHLMAHILDISAHVRSKVLSIWHHLKTQHAIPLNFLTRVLEEAIGRLED 418
            |:.|....|:.   .||.|:....|:||:.||:||.:|..|..:|::.:.....|...:.|||||
plant   363 SKSLRLRTKQA---MLEILLERCRDVSAYTRSRVLQVWAELCEEHSVSIGLWNEVASLSAGRLED 424

  Fly   419 KSSLVRRAAMHLIKSALESNPYSSKLSIDELRAKHEHEVQAMEKLNEVLEEERKQEEKLND---- 479
            ||::||::|::|:...|:.||:..:|.|....|..|   |...||||:...|...:|..:|    
plant   425 KSAIVRKSALNLLIMMLQHNPFGPQLRIASFEATLE---QYKRKLNELEPTEHASKESTSDGESC 486

  Fly   480 ----EFSSLAPELLPFIEENLTEFPDMQFD--KEESDETLMERIIPLMREKNYKDVIVLVRKVDF 538
                |...|..|....|.:      |...|  :.|:.|.:.|           |||.|    .|.
plant   487 NGDGEIDDLHLETTTKIHQ------DSLSDSCQPENGEEISE-----------KDVSV----PDI 530

  Fly   539 LAGNQNMSSLLKHEEHCVYVLALLKTYHLLAAGFKQSSEEMLQQIKTVQFLKDSIDFAVLMTSAF 603
              ||...:..|                                    :..|:..:.|:..|:::.
plant   531 --GNVEQTKAL------------------------------------IASLEAGLRFSKCMSASM 557

  Fly   604 PKLHEMLMSKTNTDVFEAVDLFTTGYMFGIHGTESGMQRMLQLVWSSDKEKRDAVSDAYKRVLFS 668
            |.|.:::.|.:.|||..|:.|......|.|.|.|:.::::|.|.:|.||...:||.:|:..:.. 
plant   558 PILVQLMASSSATDVENAILLLMRCKQFQIDGAEACLRKILPLAFSQDKSIYEAVENAFISIYI- 621

  Fly   669 TDQTGRAHAIKVVQNLSKFLSEIEYGHYTALESLMTEWVLGGDIDAAVIQVLFERFTLKLEGTTS 733
                 |.:.:...:.|.....:...|...|||.::...|..|:|.::....|::.|...:.|||:
plant   622 -----RKNPVDTAKQLLNLAIDSNIGDQAALEFIVNALVSKGEISSSTTSALWDFFCFNINGTTA 681

  Fly   734 NESRLSLQLLIMASQSKSSIVSANTAIIEDIAVGERVRRDPRIF-TSCLQLLVNSIDANNTAKYY 797
            .:||.:|.:|.||::|...|:.::...|.||..|...:.:|.:. |:|  .::......:..|..
plant   682 EQSRGALSILCMAAKSSPRILGSHIQDIIDIGFGRWAKVEPLLARTAC--TVIQRFSEEDRKKLL 744

  Fly   798 KRQNSDAEFVGKITRLFLDFFFHRSLYDFDALAMSVFEYFYRMCQAPDVIAQQLVTALLKQFNES 862
              .:|.:...|.:..|....:...::|  .|.|.......|.:...|:.:|..::.         
plant   745 --LSSGSRLFGILESLITGNWLPENIY--YATADKAISAIYMIHPTPETLASTIIK--------- 796

  Fly   863 WLVKEAAAIVPSPDKADTETVPDSQPLEIPHSQTLTPTQTQADSQSQMQGTLIPVYLVSRLIFCI 927
               |..:.:....::.:.:|..::..::|     |||.|               |..:||.:|.:
plant   797 ---KSLSTVFDVVEQEEAQTDTENNKVDI-----LTPVQ---------------VAKLSRFLFAV 838

  Fly   928 GYMTIKEMIFLD---MDIYNNMKYRDELTALEERKNRNQQAGSSHNAARLTLNMSAMEVRKRLSG 989
            .::.:.::::::   ..|......:|:..|..:....|.:|...:|.....|.::|         
plant   839 SHIAMNQLVYIESCIQKIRRQKTKKDKPAAESQNTEENLEATQENNGINAELGLAA--------- 894

  Fly   990 VAAEPQQEPDDDLVGATAEDNIAEEIHGICEDMLLYNPDALLSKLAPFIIEICKRPGEFG----D 1050
                    .||.|:...||....|.:.|...:      ..|:.:.|.|:.::|:   .|.    .
plant   895 --------SDDALLDTLAERAEREIVSGGSVE------KNLIGECATFLSKLCR---NFSLLQKH 942

  Fly  1051 PTLQQAATLALARLMTVSSRFCESNMSFLMNILNLTKNIRIKCNTVVGLSDLTFRFPNIIEPWTG 1115
            |.||.:|.|||.|.|.:.:.|||||:..|..::....:..::.|..:.|.||..||||::||||.
plant   943 PELQASAMLALCRFMIIDASFCESNLQLLFTVVENAPSEVVRSNCTLSLGDLAVRFPNLLEPWTE 1007

  Fly  1116 HFYAQLHESNTELRLTAVKMLSHLILNEMIRVKGQIADMALCIVDGNEEIRNITKQFFKEIANK- 1179
            :.||:|.:::..:|..||.:|||||||:|::|||.|.:||:||.|..|.|.::.|.||.|::.| 
plant  1008 NMYARLRDASVSVRKNAVLVLSHLILNDMMKVKGYIYEMAICIEDDVERISSLAKLFFHELSKKG 1072

  Fly  1180 SNILYNVLPDIISRLGDINLNLDEDKYRIIMSYILGLIQKDRQIETLVEKLCLRFPVTRVERQWR 1244
            ||.:||:||||:.:|.  |.||:.:.:..:|.:::|.|:||:|:|.||||||.||......:||.
plant  1073 SNPIYNLLPDILGQLS--NRNLERESFCNVMQFLIGSIKKDKQMEALVEKLCNRFSGVTDGKQWE 1135

  Fly  1245 DIAYCLGLLTYNERAVKKLMDNMQHYRDKVQVDEVYQSFKLIISNTNKLAKPELKAVVTEFENRL 1309
            .|:|.|.|||:.|:.:|||:::.:.|...:..|.|.::|:.||:...|.|||||||.:.|||.::
plant  1136 YISYSLSLLTFTEKGIKKLIESFKSYEHALAEDLVTENFRSIINKGKKFAKPELKACIEEFEEKI 1200

  Fly  1310 NE 1311
            |:
plant  1201 NK 1202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cap-D2NP_651709.1 Cnd1_N 77..243 CDD:289674 33/178 (19%)
COG5098 85..1269 CDD:227429 302/1232 (25%)
Cnd1 1091..1254 CDD:289487 75/163 (46%)
AT3G57060NP_001190114.1 COG5098 61..1156 CDD:227429 310/1254 (25%)
Cnd1_N 80..241 CDD:289674 34/176 (19%)
Cnd1 980..1145 CDD:289487 75/166 (45%)
MIS13 <1151..1270 CDD:285420 21/52 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 198 1.000 Domainoid score I881
eggNOG 1 0.900 - - E1_COG5098
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6497
Inparanoid 1 1.050 417 1.000 Inparanoid score I443
OMA 1 1.010 - - QHG54099
OrthoDB 1 1.010 - - D166920at2759
OrthoFinder 1 1.000 - - FOG0004676
OrthoInspector 1 1.000 - - oto4215
orthoMCL 1 0.900 - - OOG6_102273
Panther 1 1.100 - - LDO PTHR14222
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3869
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

Return to query results.
Submit another query.