DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bub3 and AT1G69400

DIOPT Version :9

Sequence 1:NP_001287587.1 Gene:Bub3 / 43490 FlyBaseID:FBgn0025457 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_564965.1 Gene:AT1G69400 / 843272 AraportID:AT1G69400 Length:314 Species:Arabidopsis thaliana


Alignment Length:320 Identity:98/320 - (30%)
Similarity:157/320 - (49%) Gaps:18/320 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRPPEFKLNNPPEDLISAVKFGPKSNQYMAASSWDGTLRFYDVPANQLRQKFVQDAPLLDCAF-M 64
            |.....:..||.||.:|.::|.|:||..:.| |||..||.|||.::.|..:....|.||||.| .
plant     1 MSGDRLEFENPIEDAVSRLRFSPQSNNLLVA-SWDSYLRLYDVESSSLSLELNSQAALLDCCFEN 64

  Fly    65 DIVHVVSGSLDNQLRLFDVNTQAESIIGAHEEPIRCVEHAEYVNGILTGSWDNTVKLWDMREKRC 129
            :.....||| |..:|.:|:|......||.|::....:.::.....:::..:|..:|.||.|::..
plant    65 ESTSFTSGS-DGFIRRYDLNAGTVDTIGRHDDISTSIVYSYEKGEVISTGFDEKIKFWDTRQRES 128

  Fly   130 VGTFEQNNGKVYSMSVIDEKIVVATSDRKVLIWDLRKMDSYIMKRESSLKYQTRCIRLFPNKEGY 194
            :.......|.|..::|....:||.. |..:.|:|||.:|.......|.::...|||...|...||
plant   129 LVFSTDAGGAVGCVTVSGNNLVVCV-DASMHIYDLRNLDEAFQSYASQVEVPIRCITSVPYSRGY 192

  Fly   195 VMSSIEGRVAVEYLDHDPEV---QRRKFAFKCH-RNREQNIEQIYPVNALSFHNVYQ-TFATGGS 254
            .:.|::|||||::    |..   ...|::|:|| ::|...::.:. :||:.|..... ||.||.:
plant   193 AVGSVDGRVAVDF----PNTSCSSEIKYSFRCHPKSRNGRLDGVC-INAIEFSPCGSGTFVTGDN 252

  Fly   255 DGIVNIWDGFNKKRLCQFHEYDTSISTLNFSSDGSALAIGCS--YLD--QLPETPATVPH 310
            :|.|..|:..:::||.:...|..||::|.|...|..|||..|  |.|  :..|.|....|
plant   253 EGYVISWNAKSRRRLNELPRYSNSIASLAFDHTGELLAIASSHTYQDAKEKEEAPQVFIH 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bub3NP_001287587.1 WD40 <10..296 CDD:225201 91/291 (31%)
WD40 16..262 CDD:295369 75/251 (30%)
WD40 repeat 16..53 CDD:293791 15/36 (42%)
WD40 repeat 59..93 CDD:293791 12/34 (35%)
WD40 repeat 98..134 CDD:293791 5/35 (14%)
WD40 repeat 141..175 CDD:293791 9/33 (27%)
WD40 repeat 182..222 CDD:293791 14/42 (33%)
WD40 repeat 237..283 CDD:293791 15/46 (33%)
AT1G69400NP_564965.1 WD40 13..294 CDD:421866 89/288 (31%)
WD40 repeat 16..53 CDD:293791 15/37 (41%)
WD40 repeat 58..92 CDD:293791 12/34 (35%)
WD40 repeat 97..132 CDD:293791 5/34 (15%)
WD40 repeat 140..173 CDD:293791 9/33 (27%)
WD40 repeat 180..219 CDD:293791 14/42 (33%)
WD40 repeat 234..261 CDD:293791 10/26 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1036
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1048963at2759
OrthoFinder 1 1.000 - - FOG0003514
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102928
Panther 1 1.100 - - O PTHR10971
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.780

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