DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bub3 and bub3

DIOPT Version :9

Sequence 1:NP_001287587.1 Gene:Bub3 / 43490 FlyBaseID:FBgn0025457 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_001007498.2 Gene:bub3 / 493224 XenbaseID:XB-GENE-955683 Length:330 Species:Xenopus tropicalis


Alignment Length:324 Identity:201/324 - (62%)
Similarity:247/324 - (76%) Gaps:7/324 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EFKLNNPPEDLISAVKFGPKSNQYMAASSWDGTLRFYDVPANQLRQKFVQDAPLLDCAFMDIVHV 69
            |||||..|||.||||||.|.::|::..||||.::|.||||||.||.|:....|:|||||.|..|.
 Frog    12 EFKLNQAPEDGISAVKFSPNTSQFLLVSSWDSSVRLYDVPANTLRLKYQHAGPVLDCAFYDPTHA 76

  Fly    70 VSGSLDNQLRLFDVNTQAESIIGAHEEPIRCVEHAEYVNGILTGSWDNTVKLWDMREKRCVGTFE 134
            .||.||:||::.|:||..||::|:|:.||||||:...||.|:|||||.||||||.|.....|||.
 Frog    77 WSGGLDHQLKMHDLNTDGESVVGSHDAPIRCVEYCPEVNVIVTGSWDQTVKLWDPRTPCNAGTFS 141

  Fly   135 QNNGKVYSMSVIDEKIVVATSDRKVLIWDLRKMDSYIMKRESSLKYQTRCIRLFPNKEGYVMSSI 199
            |.: |||::||..::::|.|:.|:||:||||.|.....:|||||||||||||.||||:|||:|||
 Frog   142 QPD-KVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESSLKYQTRCIRAFPNKQGYVLSSI 205

  Fly   200 EGRVAVEYLDHDPEVQRRKFAFKCHRNREQNIEQIYPVNALSFHNVYQTFATGGSDGIVNIWDGF 264
            ||||||||||...|||::|:||||||.:|.||||||||||:||||::.|||||||||.|||||.|
 Frog   206 EGRVAVEYLDPSLEVQKKKYAFKCHRLKENNIEQIYPVNAVSFHNLHNTFATGGSDGFVNIWDPF 270

  Fly   265 NKKRLCQFHEYDTSISTLNFSSDGSALAIGCSYLDQLPETPATVPHP--AIYIRYPTDQETKQK 326
            |||||||||.|.|||::|.||:|||.|||..||:.::.:    :.||  |||||..||.|||.|
 Frog   271 NKKRLCQFHRYPTSIASLAFSNDGSTLAIAASYMYEMDD----IDHPEDAIYIRQVTDAETKPK 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bub3NP_001287587.1 WD40 <10..296 CDD:225201 181/285 (64%)
WD40 16..262 CDD:295369 153/245 (62%)
WD40 repeat 16..53 CDD:293791 22/36 (61%)
WD40 repeat 59..93 CDD:293791 18/33 (55%)
WD40 repeat 98..134 CDD:293791 22/35 (63%)
WD40 repeat 141..175 CDD:293791 13/33 (39%)
WD40 repeat 182..222 CDD:293791 30/39 (77%)
WD40 repeat 237..283 CDD:293791 35/45 (78%)
bub3NP_001007498.2 WD40 20..302 CDD:421866 180/282 (64%)
WD40 repeat 23..60 CDD:293791 22/36 (61%)
WD40 repeat 66..100 CDD:293791 18/33 (55%)
WD40 repeat 105..140 CDD:293791 21/34 (62%)
WD40 repeat 147..181 CDD:293791 13/33 (39%)
WD40 repeat 188..228 CDD:293791 30/39 (77%)
WD40 repeat 243..280 CDD:293791 30/36 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 120 1.000 Domainoid score I5694
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3470
Inparanoid 1 1.050 405 1.000 Inparanoid score I1855
OMA 1 1.010 - - QHG53489
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003514
OrthoInspector 1 1.000 - - oto103285
Panther 1 1.100 - - LDO PTHR10971
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2886
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.070

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