DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bub3 and bub3

DIOPT Version :9

Sequence 1:NP_001287587.1 Gene:Bub3 / 43490 FlyBaseID:FBgn0025457 Length:326 Species:Drosophila melanogaster
Sequence 2:XP_005169562.1 Gene:bub3 / 403012 ZFINID:ZDB-GENE-041010-210 Length:338 Species:Danio rerio


Alignment Length:324 Identity:192/324 - (59%)
Similarity:242/324 - (74%) Gaps:7/324 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EFKLNNPPEDLISAVKFGPKSNQYMAASSWDGTLRFYDVPANQLRQKFVQDAPLLDCAFMDIVHV 69
            ||||...|||.:|||||.|.|:|::..|||||::|.||..||.:|.|:...||:|||||.|..|.
Zfish    18 EFKLAQGPEDSVSAVKFSPSSSQFLLVSSWDGSVRLYDASANSMRMKYQHLAPVLDCAFSDPTHA 82

  Fly    70 VSGSLDNQLRLFDVNTQAESIIGAHEEPIRCVEHAEYVNGILTGSWDNTVKLWDMREKRCVGTFE 134
            .||.||:||:..|:||..::|:|.|:.||||||....||.::|||||.:|:|||.|.....|||.
Zfish    83 WSGGLDSQLKTHDLNTDQDTIVGTHDAPIRCVEFCPEVNVLVTGSWDQSVRLWDPRTPCNAGTFT 147

  Fly   135 QNNGKVYSMSVIDEKIVVATSDRKVLIWDLRKMDSYIMKRESSLKYQTRCIRLFPNKEGYVMSSI 199
            |.. |||::||..::::|.|:.|:||:||||.|.....:|||||||||||||.||||:|||:|||
Zfish   148 QPE-KVYTLSVAGDRLIVGTAGRRVLVWDLRNMGYVQQRRESSLKYQTRCIRAFPNKQGYVLSSI 211

  Fly   200 EGRVAVEYLDHDPEVQRRKFAFKCHRNREQNIEQIYPVNALSFHNVYQTFATGGSDGIVNIWDGF 264
            ||||||||||...|||::|:||||||.:|..|||:|||||:|||:|:.|||||||||.|||||.|
Zfish   212 EGRVAVEYLDPSLEVQKKKYAFKCHRLKENGIEQVYPVNAISFHSVHNTFATGGSDGFVNIWDPF 276

  Fly   265 NKKRLCQFHEYDTSISTLNFSSDGSALAIGCSYLDQLPETPATVPHP--AIYIRYPTDQETKQK 326
            |||||||||.|.:||::|:||:|||.|||..||:.:|.:    |.||  |::||..||.|||.|
Zfish   277 NKKRLCQFHRYPSSIASLSFSTDGSLLAIASSYMQELGD----VSHPADAVFIRQVTDAETKPK 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bub3NP_001287587.1 WD40 <10..296 CDD:225201 173/285 (61%)
WD40 16..262 CDD:295369 146/245 (60%)
WD40 repeat 16..53 CDD:293791 20/36 (56%)
WD40 repeat 59..93 CDD:293791 17/33 (52%)
WD40 repeat 98..134 CDD:293791 19/35 (54%)
WD40 repeat 141..175 CDD:293791 13/33 (39%)
WD40 repeat 182..222 CDD:293791 30/39 (77%)
WD40 repeat 237..283 CDD:293791 34/45 (76%)
bub3XP_005169562.1 WD40 23..308 CDD:295369 173/285 (61%)
WD40 <23..308 CDD:225201 173/285 (61%)
WD40 repeat 29..66 CDD:293791 20/36 (56%)
WD40 repeat 72..106 CDD:293791 17/33 (52%)
WD40 repeat 111..147 CDD:293791 19/35 (54%)
WD40 repeat 155..187 CDD:293791 12/31 (39%)
WD40 repeat 194..234 CDD:293791 30/39 (77%)
WD40 repeat 249..284 CDD:293791 28/34 (82%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579976
Domainoid 1 1.000 119 1.000 Domainoid score I5783
eggNOG 1 0.900 - - E1_KOG1036
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3470
Inparanoid 1 1.050 394 1.000 Inparanoid score I1923
OMA 1 1.010 - - QHG53489
OrthoDB 1 1.010 - - D1048963at2759
OrthoFinder 1 1.000 - - FOG0003514
OrthoInspector 1 1.000 - - oto41336
orthoMCL 1 0.900 - - OOG6_102928
Panther 1 1.100 - - LDO PTHR10971
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4439
SonicParanoid 1 1.000 - - X2886
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1615.840

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