DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bub3 and Bub3

DIOPT Version :9

Sequence 1:NP_001287587.1 Gene:Bub3 / 43490 FlyBaseID:FBgn0025457 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_001304279.1 Gene:Bub3 / 12237 MGIID:1343463 Length:326 Species:Mus musculus


Alignment Length:322 Identity:195/322 - (60%)
Similarity:244/322 - (75%) Gaps:3/322 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EFKLNNPPEDLISAVKFGPKSNQYMAASSWDGTLRFYDVPANQLRQKFVQDAPLLDCAFMDIVHV 69
            |||||.||||.||:|||.|.::|::..||||.::|.||||||.:|.|:.....:|||||.|..|.
Mouse     6 EFKLNQPPEDGISSVKFSPNTSQFLLVSSWDTSVRLYDVPANSMRLKYQHTGAVLDCAFYDPTHA 70

  Fly    70 VSGSLDNQLRLFDVNTQAESIIGAHEEPIRCVEHAEYVNGILTGSWDNTVKLWDMREKRCVGTFE 134
            .||.||:||::.|:||..|:::|.|:.||||||:...||.::|||||.||||||.|.....|||.
Mouse    71 WSGGLDHQLKMHDLNTDQENLVGTHDAPIRCVEYCPEVNVMVTGSWDQTVKLWDPRTPCNAGTFS 135

  Fly   135 QNNGKVYSMSVIDEKIVVATSDRKVLIWDLRKMDSYIMKRESSLKYQTRCIRLFPNKEGYVMSSI 199
            |.. |||::||..::::|.|:.|:||:||||.|.....:|||||||||||||.||||:|||:|||
Mouse   136 QPE-KVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESSLKYQTRCIRAFPNKQGYVLSSI 199

  Fly   200 EGRVAVEYLDHDPEVQRRKFAFKCHRNREQNIEQIYPVNALSFHNVYQTFATGGSDGIVNIWDGF 264
            ||||||||||..||||::|:||||||.:|.||||||||||:||||::.|||||||||.|||||.|
Mouse   200 EGRVAVEYLDPSPEVQKKKYAFKCHRLKENNIEQIYPVNAISFHNIHNTFATGGSDGFVNIWDPF 264

  Fly   265 NKKRLCQFHEYDTSISTLNFSSDGSALAIGCSYLDQLPETPATVPHPAIYIRYPTDQETKQK 326
            |||||||||.|.|||::|.||:||:.|||..||:.::.:|..  |...|:||..||.|||.|
Mouse   265 NKKRLCQFHRYPTSIASLAFSNDGTTLAIASSYMYEMDDTEH--PEDGIFIRQVTDAETKPK 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bub3NP_001287587.1 WD40 <10..296 CDD:225201 177/285 (62%)
WD40 16..262 CDD:295369 149/245 (61%)
WD40 repeat 16..53 CDD:293791 20/36 (56%)
WD40 repeat 59..93 CDD:293791 17/33 (52%)
WD40 repeat 98..134 CDD:293791 21/35 (60%)
WD40 repeat 141..175 CDD:293791 13/33 (39%)
WD40 repeat 182..222 CDD:293791 31/39 (79%)
WD40 repeat 237..283 CDD:293791 35/45 (78%)
Bub3NP_001304279.1 WD 1 5..43 21/36 (58%)
WD40 14..296 CDD:421866 175/281 (62%)
WD40 repeat 17..54 CDD:293791 20/36 (56%)
WD 2 46..83 17/36 (47%)
WD40 repeat 60..94 CDD:293791 17/33 (52%)
WD 3 86..124 21/37 (57%)
WD40 repeat 99..134 CDD:293791 20/34 (59%)
WD 4 128..163 14/34 (41%)
WD40 repeat 141..175 CDD:293791 14/33 (42%)
WD40 repeat 182..222 CDD:293791 31/39 (79%)
WD 5 223..262 30/38 (79%)
WD40 repeat 237..274 CDD:293791 30/36 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836453
Domainoid 1 1.000 123 1.000 Domainoid score I5614
eggNOG 1 0.900 - - E1_KOG1036
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3470
Inparanoid 1 1.050 407 1.000 Inparanoid score I1865
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53489
OrthoDB 1 1.010 - - D1048963at2759
OrthoFinder 1 1.000 - - FOG0003514
OrthoInspector 1 1.000 - - oto93029
orthoMCL 1 0.900 - - OOG6_102928
Panther 1 1.100 - - LDO PTHR10971
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4439
SonicParanoid 1 1.000 - - X2886
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.800

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