DRSC/TRiP Functional Genomics Resources

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Protein Alignment ppk19 and Asic4

DIOPT Version :9

Sequence 1:NP_651708.2 Gene:ppk19 / 43489 FlyBaseID:FBgn0039679 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_071570.2 Gene:Asic4 / 63882 RGDID:621068 Length:539 Species:Rattus norvegicus


Alignment Length:500 Identity:104/500 - (20%)
Similarity:180/500 - (36%) Gaps:121/500 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 SNIHGMQHVFGE-QHLWQRCLWLAIVLGAVITGFSLYTV-------LMHRHSEQLLVSLIETTQL 96
            |.:||:....|. .|..:|.||:..:|.: :..| ||..       |...|    ||::......
  Rat    49 STLHGLGRACGPGPHGLRRTLWVLALLTS-LAAF-LYQAASLARGYLTRPH----LVAMDPAAPA 107

  Fly    97 PVYHIDFPAVAVCPWNHFNWQRAPSAFIRFLPRHPNAELRETFRQLLASMDIMNFSNFNRI--RI 159
            ||  ..||||.:|..|.|              ||          ..|:..||.:.:|...:  :.
  Rat   108 PV--AGFPAVTLCNINRF--------------RH----------SALSDADIFHLANLTGLPPKD 146

  Fly   160 LTKRNLTGISYLK--MTDLMNFMTYRCDELFVADSCVFDETPYDC-CKLFVREQTVKGQCLVFNS 221
            .......|:.|.:  |.|::|...::..::.  .||.|  :.:.| ...|....|..|:|..||:
  Rat   147 RDGHRAAGLRYPEPDMVDILNRTGHQLADML--KSCNF--SGHHCSASNFSVVYTRYGKCYTFNA 207

  Fly   222 --MISENSRKKHLINQFYPHKLSTAGEDSGLKFTINASYS-----FMNNIDALTPFGMNLMI--K 277
              ..|..||              ..|..|||:..::....     :....:.....|:.:.|  :
  Rat   208 DPQSSLPSR--------------AGGMGSGLEIMLDIQQEEYLPIWRETNETSFEAGIRVQIHSQ 258

  Fly   278 EPRQWSNEMMYHLYPDTENFVAVHPLVTETSPNTYEMSPKKRRCYFDDE-KNPTFQNTSLTYNRE 341
            |...:.:::.:.:.|..:.||:     .:....||...| ...|..:.: :.|..|..| .|:..
  Rat   259 EEPPYIHQLGFGVSPGFQTFVS-----CQEQRLTYLPQP-WGNCRAESKLREPELQGYS-AYSVS 316

  Fly   342 NCLVVCLHLVVWKTCQCSL------PAFLPPIDGVPECGINDAQCLGNNSDIFTYVKMGDQEKYI 400
            .|.:.|....|.:.|.|.:      ....||...: ||..:....||..|:       |.     
  Rat   317 ACRLRCEKEAVLQRCHCRMVHMPGNETICPPNIYI-ECADHTLDSLGGGSE-------GP----- 368

  Fly   401 NDSRQGHFCDCPDNCNSRLYEMSLNVRKL-----------DYPKNST---DQLIKAQVYYGQRVM 451
                    |.||..||...|...:::.|:           .|.:|.|   :..:...|::.....
  Rat   369 --------CFCPTPCNLTRYGKEISMVKIPNRGSARYLARKYNRNETYIRENFLVLDVFFEALTS 425

  Fly   452 TKIITKLKYTNIDLLANFGGIISLYIGASVMSFIELLFVLGKLMW 496
            ..:..:..|....||.:.||.:.|:||||:::.:|:|..:.::.|
  Rat   426 EAMEQRAAYGLSALLGDLGGQMGLFIGASILTLLEILDYIYEVSW 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk19NP_651708.2 ASC 39..489 CDD:279230 102/491 (21%)
AceK 116..>139 CDD:295079 2/22 (9%)
Asic4NP_071570.2 ASC 40..488 CDD:295594 103/499 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 501..531
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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