DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk19 and asic1b

DIOPT Version :9

Sequence 1:NP_651708.2 Gene:ppk19 / 43489 FlyBaseID:FBgn0039679 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_999956.1 Gene:asic1b / 407672 ZFINID:ZDB-GENE-040513-1 Length:557 Species:Danio rerio


Alignment Length:519 Identity:110/519 - (21%)
Similarity:178/519 - (34%) Gaps:162/519 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 LCNSFAHSNIHGMQHVFGE-------QHLWQRCLWLAI------VLGAVI--TGFSLYTVLMHRH 82
            |...|...::||..|||.|       |.||.....|||      |:..||  ..:...|:|..|:
Zfish    66 LATFFGGCSLHGANHVFVEDKKFSIRQGLWALVFLLAISMFLLQVVDRVIYYLQYDYVTLLDERN 130

  Fly    83 SEQLLVSLIETTQLPVYHIDFPAVAVCPWNHFNWQRAPSAFIRF--------------LPRHPNA 133
            ::               ::.|||:.:|.:|.|...:...:.:.|              :|..|..
Zfish   131 AK---------------NMTFPAITLCNYNTFRRSQLSYSDLLFMGPLLGYEDNMAPGIPLAPEP 180

  Fly   134 ELRETFRQLLASMDIMNFSNFNRIRILTKRNLTGISYLKMTDLM---NFMTYRCD-----ELFVA 190
            : |:..|..||..       |||.|            .:|.|::   ||....|.     |:|  
Zfish   181 D-RQGSRFSLAEF-------FNRTR------------HRMDDMLLECNFAGKECGAEHWREIF-- 223

  Fly   191 DSCVFDETPYDCCKLFVREQTVKGQCLVFNSMISENSRKKHLINQFYPHKLST-AGEDSGLKFTI 254
                   |.|             |:|..|||  .::.|         |..::| .|..:||:..:
Zfish   224 -------TRY-------------GKCYTFNS--GQDGR---------PLLITTKGGMGNGLEIML 257

  Fly   255 NASYS----FMNNIDALT-PFGMNLMI---KEPRQWSNEMMYHLYPDTENFVAVHPLVTETSPNT 311
            :....    .....|..| ..|:.:.|   .|| .:.:::.:.:.|..:.||:     .:....|
Zfish   258 DIQQDEYLPVWGETDETTFEAGIKVQIHTQDEP-PFIDQLGFGVAPGFQTFVS-----CQEQRLT 316

  Fly   312 YEMSPKKRRCYFDDEKNPTFQNTSLTYNRENCLVVCLHLVVWKTCQCSLPAFLPPIDGVPECGIN 376
            |...|     :.|.:..|...:...||:...|.:.|....:.:.|.|.: ..:|  ...|.|...
Zfish   317 YLPPP-----WGDCKATPIDSDFFNTYSITACRIDCETRYLVENCNCRM-VHMP--GDAPYCTPE 373

  Fly   377 DAQCLGNNSDIFTYVKMGDQEKYINDSRQGHFCDCPDNCNSRLY--EMSL-------NVRKLDYP 432
            .            |.:..|........|...:|.|...||...|  |:|.       :.:.|...
Zfish   374 Q------------YKECADPALDFLVERDNDYCVCETPCNMTRYGKELSFVRIPSKASAKYLAKK 426

  Fly   433 KNSTDQLIKAQVYYGQRVMTKIITKLKYTNID---------LLANFGGIISLYIGASVMSFIEL 487
            .|.|:|.|...:    .|:......|.|..|:         ||.:.||.:.|:||||:::.:||
Zfish   427 YNKTEQYISDNI----MVLDIFFEALNYETIEQKKAYELAGLLGDIGGQMGLFIGASILTILEL 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk19NP_651708.2 ASC 39..489 CDD:279230 108/513 (21%)
AceK 116..>139 CDD:295079 4/36 (11%)
asic1bNP_999956.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 36..57
ASC 66..548 CDD:295594 110/519 (21%)
Selectivity filter. /evidence=ECO:0000305 477..479 1/1 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.020

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