DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk19 and asic1c

DIOPT Version :9

Sequence 1:NP_651708.2 Gene:ppk19 / 43489 FlyBaseID:FBgn0039679 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_021325802.1 Gene:asic1c / 407670 ZFINID:ZDB-GENE-040513-3 Length:562 Species:Danio rerio


Alignment Length:533 Identity:106/533 - (19%)
Similarity:186/533 - (34%) Gaps:148/533 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 SNIHGMQHVFG-EQHLWQRCLWLAIVLGAVITGFSLYTVLMHRHSEQLLVSLIETTQLPVY---- 99
            :.:||::|.|. .:...||..||..:|  |..|. |:|...:|    :|..|.......:|    
Zfish    45 TKVHGLKHAFSPHKSKTQRLFWLLALL--VCLGL-LFTWSWNR----ILYLLSYPAVTKIYMVWS 102

  Fly   100 -HIDFPAVAVCPWNHFNWQRAPSAFIRFLPR-------------HPNAELRETFRQLLASMDIMN 150
             ::.|||:..|..|...        :..|.|             |.|..|.   ||   |:.::.
Zfish   103 NNMTFPAITFCNQNRLR--------VSSLTRDDLYYSGYWMDILHLNHTLN---RQ---SVSMLK 153

  Fly   151 FSNFNRIRILTKRNLTGISY--------LKMTDLMNFMTYRCDEL-----FVADSCVFDETPYDC 202
            .|. :|.|:|   :|...|:        |..|::::.:.::..::     |..::|.:       
Zfish   154 HSR-HRERLL---HLLDFSHYSPPPDQSLNTTEMIDRLGHQLQDMLLECRFRGENCTY------- 207

  Fly   203 CKLFVREQTVKGQCLVFNSMISENSRKKHLINQFYPHKLST--AGEDSGLKFTINASYSFMNNID 265
             |.|....|..|:|..|||.:..|.            .|:|  .|..:||:..::...      |
Zfish   208 -KNFTPIYTRYGKCYTFNSGLDGNP------------LLTTLKGGTGNGLEIMLDIQQ------D 253

  Fly   266 ALTPF-----------GMNLMI---KEPRQWSNEMMYHLYPDTENFVAVHPLVTETSPNTYEMSP 316
            ...|.           |:.:.|   .|| .:.:::.:.:.|..:.||:....:....|..:.   
Zfish   254 EYLPVWGDTDETSYEAGIKVQIHSQDEP-PFIDQLGFGVAPGFQTFVSCQQQLLLYLPPPWG--- 314

  Fly   317 KKRRCYFDDEKNPTFQNTSLTYNRENCLVVCLHLVVWKTCQCSLPAFLPPIDGV--PECGINDAQ 379
                   |....|.......||:...|.:.|....:.:.|.|.: ..:|....|  ||       
Zfish   315 -------DCRSAPMDSEYFSTYSITACRIDCETRYLLENCNCRM-VHMPGTSTVCTPE------- 364

  Fly   380 CLGNNSDIFTYVKMGDQEKYINDSRQGHFCDCPDNCNSRLYEMSLNVRKLDYPKNS--------- 435
                     .|....|........:...:|.|...||...|...|::.|:....::         
Zfish   365 ---------QYKDCADPALDFLVEKDNDYCVCDTPCNMTRYGKELSMVKIPSKASAKYLAKKFNK 420

  Fly   436 -----TDQLIKAQVYYGQRVMTKIITKLKYTNIDLLANFGGIISLYIGASVMSFIELLFVL---- 491
                 ||.::...:::......||..|..|....||.:.||.:.|:|||||::.:|:...|    
Zfish   421 TEQYITDNILVLDIFFEALNYEKIEQKKAYEVAGLLGDIGGQMGLFIGASVLTILEIFDYLYEVL 485

  Fly   492 -GKLMWGFIRDAR 503
             .|::...:|..|
Zfish   486 KDKILGSVLRKRR 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk19NP_651708.2 ASC 39..489 CDD:279230 102/512 (20%)
AceK 116..>139 CDD:295079 5/35 (14%)
asic1cXP_021325802.1 ASC 34..531 CDD:322155 106/533 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.020

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