DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk19 and asic2

DIOPT Version :9

Sequence 1:NP_651708.2 Gene:ppk19 / 43489 FlyBaseID:FBgn0039679 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_005164179.1 Gene:asic2 / 407669 ZFINID:ZDB-GENE-040513-4 Length:564 Species:Danio rerio


Alignment Length:535 Identity:109/535 - (20%)
Similarity:191/535 - (35%) Gaps:131/535 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PRPGLLRFR------NNPRGIKFREKLCNSFAHSNIHGMQHVFGEQH-LWQRCLWLAIVLGAVIT 70
            |.||..|.|      ..||....|..:. ..:.:.:||::|:....: |.:|..|:.    |..|
Zfish    39 PTPGQRRARRRHTRPGTPRDDLSRLTVA-LLSRTRLHGLRHICSPSNSLSRRAFWMI----AFCT 98

  Fly    71 GFSLYTVLMHRHSEQLLVSLIETTQLPVY-----HIDFPAVAVCPWNHFNWQRAPSAFIRFLPRH 130
            ...|   |:...|.:||..|...|...|:     .:.||.|.:|..|.........:.:.|....
Zfish    99 CLGL---LLSWSSNRLLHWLAFPTHTRVHTEWAKELAFPTVTICNNNPVRLYHLTKSDLYFAGHW 160

  Fly   131 PNAEL-RETFRQLLASMDIMN------FSNFNRIRI-LTKRNLTGISYLKMTDLMNFMTYRCDEL 187
            ....| ..|.|.|:  :|::.      ||..:..|: |..|...|.|    .:.|:.:.::.:::
Zfish   161 LGLLLANRTARPLV--LDLLQDDRRGWFSKLSDFRLFLPPRRFEGTS----LEFMDRLGHQLEDM 219

  Fly   188 FVADSCVFDETP---YDCCKLFVREQTVKGQCLVFNSMISENSRKKHLINQFYPHKLSTAGEDSG 249
            .:|  |.:...|   ::...:|.|    .|:|.:||:.....:.:..:          ..|..:|
Zfish   220 LLA--CKYRGEPCGAHNFSTVFTR----YGKCYMFNAAEEGKTLRTTM----------KGGTGNG 268

  Fly   250 LKFTINASYSFMNNIDALTPF-----------GMNLMI---KEPRQWSNEMMYHLYPDTENFVAV 300
            |:..::...      |...|.           |:.:.|   .|| .:.:|:.:.:.|..:.||| 
Zfish   269 LEIMLDIQQ------DEYLPVWGETEETAFEAGVRVQIHSQAEP-PFVHELGFGVAPGFQTFVA- 325

  Fly   301 HPLVTETSPNTYEMSPKKRRCYFDDEKNPTFQNTSLTYNRENCLVVCLHLVVWKTCQCSLPAFLP 365
                |:....|| :.|....|......:..||    .|:...|.:.|....:.:.|.|.: .::|
Zfish   326 ----TQEQRLTY-LPPPWGECVSRALDSGLFQ----VYSVSACRIECETRYIVENCNCRM-VYMP 380

  Fly   366 PIDGVPECGINDAQCLGNNSDIFTYVKMGDQEKYIN---------DSRQGHFCDCPDNCNSRLYE 421
              ...|.|                     ..|:|.:         .:.:|..|.|...||...|.
Zfish   381 --GDSPYC---------------------TPEQYKDCAEPALAALSAVEGTNCICRSPCNMTRYN 422

  Fly   422 MSLNVRKLD--------------YPKNSTDQLIKAQVYYGQRVMTKIITKLKYTNIDLLANFGGI 472
            ..|::.|:.              ..|..||.::...|::.......|..|..|....||.:.||.
Zfish   423 KELSMVKIPSKTSARYLEKKFNRSEKYITDNILVLDVFFEALNYETIEQKKAYEVAGLLGDIGGQ 487

  Fly   473 ISLYIGASVMSFIEL 487
            :.|:||||:::.:||
Zfish   488 MGLFIGASILTLLEL 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk19NP_651708.2 ASC 39..489 CDD:279230 101/503 (20%)
AceK 116..>139 CDD:295079 2/23 (9%)
asic2XP_005164179.1 ASC 71..538 CDD:295594 101/502 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.020

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