DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk19 and Asic3

DIOPT Version :10

Sequence 1:NP_651708.2 Gene:ppk19 / 43489 FlyBaseID:FBgn0039679 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_038963092.1 Gene:Asic3 / 286920 RGDID:708578 Length:564 Species:Rattus norvegicus


Alignment Length:537 Identity:110/537 - (20%)
Similarity:186/537 - (34%) Gaps:139/537 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RPRPGLLRF-RNNPRGIKFREKLCNSFAHSNIHGMQHVFGEQHL-WQRCLWLAIVLGAVIT---- 70
            :||.||... |.....|:.....|      .:||:.|:||...| .:|.||...||.::..    
  Rat     2 KPRSGLEEAQRRQASDIRVFASSC------TMHGLGHIFGPGGLTLRRGLWATAVLLSLAAFLYQ 60

  Fly    71 ---------GFSLYTVLMHRHSEQLLVSLIETTQLPVYHIDFPAVAVC-----------PWNHFN 115
                     .|...|.|..|.|.||               .||||.:|           | |..:
  Rat    61 VAERVRYYGEFHHKTTLDERESHQL---------------TFPAVTLCNINPLRRSRLTP-NDLH 109

  Fly   116 WQRAPSAFIRFLPRHPNAELRETFRQLLASMDIMNFSNFNRIRILTKRNLTGISYLKMTDLMNFM 180
            |  |.:|.:...|....|.|| ...|..|....|....|:..::..:   .|.|   :.|::...
  Rat   110 W--AGTALLGLDPAEHAAYLR-ALGQPPAPPGFMPSPTFDMAQLYAR---AGHS---LEDMLLDC 165

  Fly   181 TYRCDELFVADSCVFDETPYDCCKLFVREQTVKGQCLVFNSMISENSRKKHLINQFYPHKLSTAG 245
            .||      ...|    .|.:...:|.|    .|||..|||    .:....|:.      ....|
  Rat   166 RYR------GQPC----GPENFTVIFTR----MGQCYTFNS----GAHGAELLT------TPKGG 206

  Fly   246 EDSGLKFTINASYS----FMNNIDALTPFGMNLMIK-----EPRQWSNEMMYHLYPDTENFVAVH 301
            ..:||:..::....    ...:::. |||.:.:.::     ||.. .:::.:...|..:.||:..
  Rat   207 AGNGLEIMLDVQQEEYLPIWKDMEE-TPFEVGIRVQIHSQDEPPA-IDQLGFGAAPGHQTFVSCQ 269

  Fly   302 PLVTETSP------NTYEMSPKKRRCYFDDEKNPTF----QNTSLTYNRENCLVVCLHLVVWKTC 356
            .......|      ||..:.|..    ||.|.:...    ...|..|:...|.:.|....|.:.|
  Rat   270 QQQLSFLPPPWGDCNTASLDPDD----FDPEPSDPLGSPRPRPSPPYSLIGCRLACESRYVARKC 330

  Fly   357 QCSLPAFLPPIDGVPECGINDAQCLGNNSDIFTYVKMGDQEKYINDSR-QGHFCDCPDNCNSRLY 420
            .|.: ..:|                 .||.:.:..:..|......|:. :...|.||:.|.:..|
  Rat   331 GCRM-MHMP-----------------GNSPVCSPQQYKDCASPALDAMLRKDTCVCPNPCATTRY 377

  Fly   421 EMSLNVRKL-----------DYPKNS---TDQLIKAQVYYGQRVMTKIITKLKYTNIDLLANFGG 471
            ...|::.::           .|.::.   |:.::...:::.......:..|..|...:||.:.||
  Rat   378 AKELSMVRIPSRASARYLARKYNRSESYITENVLVLDIFFEALNYEAVEQKAAYEVSELLGDIGG 442

  Fly   472 IISLYIGASVMSFIELL 488
            .:.|:||||:::.:|:|
  Rat   443 QMGLFIGASLLTILEIL 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk19NP_651708.2 ASC 37..489 CDD:459966 103/511 (20%)
Asic3XP_038963092.1 ENaC 17..547 CDD:273304 105/522 (20%)

Return to query results.
Submit another query.