DRSC/TRiP Functional Genomics Resources

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Protein Alignment ppk19 and Scnn1a

DIOPT Version :9

Sequence 1:NP_651708.2 Gene:ppk19 / 43489 FlyBaseID:FBgn0039679 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_113736.1 Gene:Scnn1a / 25122 RGDID:3639 Length:699 Species:Rattus norvegicus


Alignment Length:620 Identity:122/620 - (19%)
Similarity:207/620 - (33%) Gaps:198/620 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LLRFRNNPRGIKFREKLCNSFAHSNIHGMQHVFGEQH------LWQRCLWLAIVLGAVITGFSL- 74
            |:.|..:.|  :..:..||   ::.|||...:...:|      .| ..|||. ..|.:...|:| 
  Rat    74 LIEFHRSYR--ELFQFFCN---NTTIHGAIRLVCSKHNRMKTAFW-AVLWLC-TFGMMYWQFALL 131

  Fly    75 ------YTVLM--HRHSEQLLVSLIETTQLPVYHIDFPAVAVCPWNHFNW--------------- 116
                  |.|.:  :.:|::|:               ||||.||..|.:.:               
  Rat   132 FEEYLSYPVSLNINLNSDKLV---------------FPAVTVCTLNPYRYTEIKEELEELDRITE 181

  Fly   117 --------------------QRAPSAFIRFLPRHPNAELR------------------------- 136
                                :|:....:...| ||...||                         
  Rat   182 QTLFDLYKYNSSYTRQAGARRRSSRDLLGAFP-HPLQRLRTPPPPYSGRTARSGSSSVRDNNPQV 245

  Fly   137 -----------------ETFRQLLAS-MD-IMNFSNFNRIRILTKRNLTGISYLKMTDLMNFMTY 182
                             :.|.|..:| :| :..:..|:.|.||::.:.|..: |:...|.||:. 
  Rat   246 DRKDWKIGFQLCNQNKSDCFYQTYSSGVDAVREWYRFHYINILSRLSDTSPA-LEEEALGNFIF- 308

  Fly   183 RCDELFVADSCVFDETPYDCCKLFVREQTVKGQCLVFNSMISENSRKKHLINQFYPHKLSTAGED 247
                     :|.|::.|.:..........:.|.|..||...:.|....           |..|.:
  Rat   309 ---------TCRFNQAPCNQANYSKFHHPMYGNCYTFNDKNNSNLWMS-----------SMPGVN 353

  Fly   248 SGLKFTINASYS-FMNNIDALTPFGMNLMI---KEPRQWSNEMMYHLYPDTENFVAVHPLVTETS 308
            :||..|:....: |:..:..:|  |..:|:   .|| .:.::..::|.|..|..:::.....::.
  Rat   354 NGLSLTLRTEQNDFIPLLSTVT--GARVMVHGQDEP-AFMDDGGFNLRPGVETSISMRKEALDSL 415

  Fly   309 PNTYEMSPKKRRCYFDDEKNPTFQNTSLTYNRENCLVVCLHLVVWKTCQCSLPAFLPPIDGVPEC 373
            ...|      ..|..:....|........|.::.|:..|....:.|.|.|:. .|.|...||..|
  Rat   416 GGNY------GDCTENGSDVPVKNLYPSKYTQQVCIHSCFQENMIKKCGCAY-IFYPKPKGVEFC 473

  Fly   374 GINDAQCLGNNSDIFTYVKMGDQEKYINDSRQGHFCDCPDNCNSRLYEMSLNVRKLDYPK-NSTD 437
            ........|     :.|.|:  |..:..|| .|.|..|...|:...|::|....:  :|. .|.|
  Rat   474 DYRKQSSWG-----YCYYKL--QGAFSLDS-LGCFSKCRKPCSVINYKLSAGYSR--WPSVKSQD 528

  Fly   438 ---QLIKAQVYY-------GQRVMTKIITKLKY---------TNIDLLANFGGIISLYIGASVMS 483
               :::..|..|       |...:.....:|.|         |.:.||:|.|...||:.|:||:|
  Rat   529 WIFEMLSLQNNYTINNKRNGVAKLNIFFKELNYKTNSESPSVTMVSLLSNLGSQWSLWFGSSVLS 593

  Fly   484 FIEL------LFVLGKLM---------WGFIRDAR 503
            .:|:      |.|:..||         |...|.||
  Rat   594 VVEMAELIFDLLVITLLMLLRRFRSRYWSPGRGAR 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk19NP_651708.2 ASC 39..489 CDD:279230 109/573 (19%)
AceK 116..>139 CDD:295079 6/99 (6%)
Scnn1aNP_113736.1 ENaC 80..677 CDD:273304 120/614 (20%)
deg-1 88..600 CDD:273309 111/574 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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