DRSC/TRiP Functional Genomics Resources

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Protein Alignment ppk19 and Scnn1b

DIOPT Version :9

Sequence 1:NP_651708.2 Gene:ppk19 / 43489 FlyBaseID:FBgn0039679 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_036780.1 Gene:Scnn1b / 24767 RGDID:3640 Length:638 Species:Rattus norvegicus


Alignment Length:614 Identity:131/614 - (21%)
Similarity:216/614 - (35%) Gaps:195/614 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LLRFRNNPRGIKFREKL---CNSFAHSNIHGMQHVFGEQHLWQRCLW--LAIVLGAVIT---GFS 73
            |.|.:..| |..::|.|   ||   ::|.||.:.:..|... ::.:|  |.::...::.   |..
  Rat    11 LHRLQKGP-GYTYKELLVWYCN---NTNTHGPKRIICEGPK-KKAMWFLLTLLFACLVCWQWGVF 70

  Fly    74 LYTVLMHRHSEQLLVSLIETTQLPVYHIDFPAVAVC---PW------------------------ 111
            :.|.|    |.::.|||    .:....::||||.||   |:                        
  Rat    71 IQTYL----SWEVSVSL----SMGFKTMNFPAVTVCNSSPFQYSKVKHLLKDLYKLMEAVLDKIL 127

  Fly   112 ----NHFN---------WQRAPSAFI-RFLPRHP---------------------NAE-LRETFR 140
                :|.|         |...|...| ...|.||                     ||: .:...|
  Rat   128 APKSSHTNTTSTLNFTIWNHTPLVLIDERNPDHPVVLNLFGDSHNSSNPAPGSTCNAQGCKVAMR 192

  Fly   141 QLLASMDIMNFSNFNRIR-------ILTKRNLTGISYLKMTDLMNFMTYRCDELFVADSCVFDET 198
            ...|:..:..|.||....       ||...|:  .|.:...||:. |.|..|.:.:|  |:|...
  Rat   193 LCSANGTVCTFRNFTSATQAVTEWYILQATNI--FSQVLPQDLVG-MGYAPDRIILA--CLFGTE 252

  Fly   199 PYDCCK------LFVREQTVKGQCLVFNSMISENSRKKHLINQFYPHKLSTAGEDSGLKFTINAS 257
            |   |.      :|..:.   |.|.:||..::|.:...           :..|.:.|||..::..
  Rat   253 P---CSHRNFTPIFYPDY---GNCYIFNWGMTEKALPS-----------ANPGTEFGLKLILDIG 300

  Fly   258 YSFMNNIDALTPF-----GMNLMIKEPRQW---SNEMMYHLYPDTENFVAVHPLVTETSPNTYEM 314
            .      :...||     |..||:.|.|.:   ..|.:|.: ..||..:.|  |:.:........
  Rat   301 Q------EDYVPFLASTAGARLMLHEQRTYPFIREEGIYAM-AGTETSIGV--LLDKLQGKGEPY 356

  Fly   315 SPKKRRCYFDDEKNPTFQNTSLTYNRENCLVVCLHLVVWKTC-------QCSLPAFLPPIDGVPE 372
            ||    |..:. .:...||....||....:..|||     :|       .||...:|.|:..   
  Rat   357 SP----CTMNG-SDVAIQNLYSDYNTTYSIQACLH-----SCFQDHMIHNCSCGHYLYPLPA--- 408

  Fly   373 CGINDAQCLGNNSDI--FTYVKMGDQEKYINDSRQGHFCDCPDNCNSRLYEMSLNVRKLDYPKNS 435
               .:..|  ||.|.  :.|..:..|...:  .|:.....|.::||...|:|::::  .|:|..:
  Rat   409 ---GEKYC--NNRDFPDWAYCYLSLQMSVV--QRETCLSMCKESCNDTQYKMTISM--ADWPSEA 464

  Fly   436 TDQ----------------------LIKAQVYYGQRVMTKIITKLKYTNID-LLANFGGIISLYI 477
            ::.                      ::|..:|: |....:.|.:....||. ||:|.||....::
  Rat   465 SEDWILHVLSQERDQSSNITLSRKGIVKLNIYF-QEFNYRTIEESPANNIVWLLSNLGGQFGFWM 528

  Fly   478 GASVMSFIELLFVLGKLMWGFIRDARIKL 506
            |.||:..||    .|:::..||....|||
  Rat   529 GGSVLCLIE----FGEIIIDFIWITVIKL 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk19NP_651708.2 ASC 39..489 CDD:279230 117/570 (21%)
AceK 116..>139 CDD:295079 8/45 (18%)
Scnn1bNP_036780.1 ENaC 21..621 CDD:273304 127/603 (21%)
deg-1 29..538 CDD:273309 119/578 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 598..620
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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