DRSC/TRiP Functional Genomics Resources

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Protein Alignment ppk19 and asic-1

DIOPT Version :9

Sequence 1:NP_651708.2 Gene:ppk19 / 43489 FlyBaseID:FBgn0039679 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_491214.3 Gene:asic-1 / 191422 WormBaseID:WBGene00022815 Length:823 Species:Caenorhabditis elegans


Alignment Length:416 Identity:87/416 - (20%)
Similarity:143/416 - (34%) Gaps:128/416 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 SMDIMNFSNFNRIRILTKRNLTGISYLKMTDLMNFMTYRCDELFVADSCVFDETPYDCCKLFVRE 209
            :|:.|.|:    :..||:.....|||.|...:|.                        |....||
 Worm   464 AMENMIFA----VDALTEEEKWKISYNKSDFIMK------------------------CSFNGRE 500

  Fly   210 QTVK-----------GQCLVFNSMISENSRKKHLINQFYPHKLSTAGEDSGLKFTINASYSFMNN 263
            ..||           |.|..:...:..|:.::             :|...||:..:     |:|.
 Worm   501 CNVKHDFVEYLDPTYGACFTYGQKLGNNTNER-------------SGPAYGLRLEV-----FVNV 547

  Fly   264 IDAL---TPFGMNLMI----KEPRQWSNEMMYHLYPDTENFVAVHPLVTETSPNTYEM----SPK 317
            .:.|   ...|:.|.:    ::|           :|||..|.|....|:........|    :| 
 Worm   548 TEYLPTTEAAGVRLTVHATDEQP-----------FPDTLGFSAPTGFVSSFGIKLKSMVRLPAP- 600

  Fly   318 KRRCYFD---DEKNPTFQNTSLTYNRENCLVVCLHLVVWKTCQCSLPAFLPPIDGVPECGIND-- 377
                |.|   :.|...|..|...||.|.|...|:...:.|||.|..|.| ||......|.::|  
 Worm   601 ----YGDCVREGKTEDFIYTQKAYNTEGCQRSCIQKHLSKTCGCGDPRF-PPYRESKNCPVDDPY 660

  Fly   378 -AQCLGNNSDIFTYVKMGDQEKYINDSRQ-GHFCDCPDNCNSRLYEMSLNVRK------------ 428
             .:|:.|...:.|           .||:: |  |.|...||..:|.:|.:..:            
 Worm   661 KRECIKNEMHVAT-----------RDSKKLG--CSCKQPCNQDVYSVSYSASRWPAIAGDLSGCP 712

  Fly   429 --------LDYPKNSTDQLIKAQVYYGQRVMTKIITKLKYTNIDLLANFGGIISLYIGASVMSFI 485
                    |:|.:.....:   :||:.|.....::....|...:||::|||.:.|::|.||::..
 Worm   713 LGMAAHHCLNYKREQGSMI---EVYFEQLNYESLLESEAYGWSNLLSDFGGQLGLWMGVSVITIG 774

  Fly   486 ELLFVLGKLMWGFIRDARIKLKEYTK 511
            |:.....::....|...|.|.:...|
 Worm   775 EVACFFFEVFISLISSNRTKRRPARK 800

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk19NP_651708.2 ASC 39..489 CDD:279230 83/392 (21%)
AceK 116..>139 CDD:295079
asic-1NP_491214.3 deg-1 16..779 CDD:273309 83/393 (21%)
ASC 17..>104 CDD:279230
ASC <469..788 CDD:295594 81/397 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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