DRSC/TRiP Functional Genomics Resources

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Protein Alignment ppk19 and asic-2

DIOPT Version :9

Sequence 1:NP_651708.2 Gene:ppk19 / 43489 FlyBaseID:FBgn0039679 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_492099.1 Gene:asic-2 / 189058 WormBaseID:WBGene00012137 Length:545 Species:Caenorhabditis elegans


Alignment Length:569 Identity:110/569 - (19%)
Similarity:186/569 - (32%) Gaps:172/569 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 SNIHGMQHVFGEQHLWQRCLWLAI---VLGAVITGFSLYTVLMHRHSEQLLVSLIETTQLPVYHI 101
            |.:..:.||....:...|..|:||   |||  :..:.||.::....|....|:    |::.....
 Worm    17 STVAVVPHVANANNKISRIFWIAIFLFVLG--MFAYELYILIAKFFSYPATVN----TEILFEKQ 75

  Fly   102 DFPAVAVCPWNHFNWQ--RAPSAFIRFLPRHPNAELRETFRQLLASMDIMNFSNFNRIR------ 158
            .||.|.||..|.:.:.  ::.|||             .:...|:.:........|:..:      
 Worm    76 IFPVVTVCNMNPYKYSVVKSNSAF-------------SSVNTLMTTYSDATVGTFSTDKWGLYAD 127

  Fly   159 --------------ILTKRNLTG--------ISYLKMTDLMNFMTYRCDELFVADSCVFDETPYD 201
                          ::.:.||..        .:|..:....:|....|.|   :|...|.:..| 
 Worm   128 NDETYDLDSRAADALVLEANLISDTAKVPALYTYADLIQDCSFAGIPCSE---SDFTKFIDPVY- 188

  Fly   202 CCKLFVREQTVKGQCLVFNSMISENSRKKHLINQFYPHKLSTAGEDSGLKFTINASYSFMN-NID 265
                        |.|..||...|.|            :.:|..|...|||..:..:.:..| |.|
 Worm   189 ------------GACYSFNEDASLN------------YSVSREGIQFGLKLMLTVTQTKTNGNTD 229

  Fly   266 AL-------TPFGMNLMIKEPRQWSNEMMYHL-YPD------TENFVAVHPLVT--ETSPNTYEM 314
            :|       ...|:|.....|...||.:...: |..      |:|..|..|..|  :..|::.: 
 Worm   230 SLPTTKLAGARIGVNSRGSSPGLDSNGIDAGVGYESAVSVSLTQNVRAKKPYGTCVDREPDSSD- 293

  Fly   315 SPKKRRCYFDDEKNPTFQNTSLTYNRENCLVVCLHLVVWKTCQCSLPAFLPPIDGVPECGINDAQ 379
                   |:.|          ..|..|.|...|........|||:.|..        ..|..|..
 Worm   294 -------YYKD----------FIYTLETCFNGCKQRDTIAKCQCANPRL--------ALGSTDTA 333

  Fly   380 CLGNNSDIFTYVKM-GDQEKYINDSRQGHFCDCPDNCNSRLYEMSLNVRKLDYPK---------- 433
            |....:|:.....: |:|.....:......|:|...|:...|..::::.:  :|.          
 Worm   334 CQPIKADLDCLQTLKGNQTSSTPNIDLLVECNCNPPCDESTYTPTVSLAQ--FPSTSYYVATSST 396

  Fly   434 ------NSTDQLIKA----QVYYGQRVMT----------KIITKLK-YTNIDLLANFGGIISLYI 477
                  :||:....:    |.:|....|.          ::.|:.. ||..:::.:.||...|::
 Worm   397 AGVGSCSSTNSKFSSKSDCQKWYNNNGMIIQVFLETLSYELYTETAGYTVSNVINDLGGQAGLWL 461

  Fly   478 GASVMSFIE---LLFVLGK--LMWGFIR----------DARIKLKEYTK 511
            |.||:|.:|   |:.|:|.  :..|.|:          |.|||..|..|
 Worm   462 GLSVISVVEMTGLMLVMGAFCVTGGAIKMAPDDDEIENDHRIKDVEDVK 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk19NP_651708.2 ASC 39..489 CDD:279230 100/533 (19%)
AceK 116..>139 CDD:295079 3/24 (13%)
asic-2NP_492099.1 deg-1 12..474 CDD:273309 99/531 (19%)
ASC 13..471 CDD:279230 98/528 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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