DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk19 and del-7

DIOPT Version :9

Sequence 1:NP_651708.2 Gene:ppk19 / 43489 FlyBaseID:FBgn0039679 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_501276.4 Gene:del-7 / 183498 WormBaseID:WBGene00016699 Length:614 Species:Caenorhabditis elegans


Alignment Length:550 Identity:107/550 - (19%)
Similarity:188/550 - (34%) Gaps:169/550 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 KFREKLCNSFAHSN--------IHGMQHVFGEQHLWQRCLWLAIVLGAVITGFSLYTV--LMHRH 82
            ::.|.|..:..|.|        :||:........|..:..|..:::..  .|:|:...  ::.::
 Worm    46 QYEEALKIAQFHCNCKYLWLRELHGLSAFMMSNSLMSKVFWAIVIMAC--AGWSIGNTISILKQY 108

  Fly    83 SEQLLVSLIETTQLPVYHIDFPAVAVCP---------------WNHFNWQRAPSAFIRFLPRHPN 132
            .::...:|:  |.||...:.||.:..||               :||..:.               
 Worm   109 GDEATTTLL--TILPTKQLKFPTMIFCPRNPDFLNYYNVLEDMYNHLGYM--------------- 156

  Fly   133 AELRETFRQLLASMDIMNFSN-----FNRIRILTKRNLTGISYLK---------MTDLM-NFMTY 182
             |....|..|..:|....|.|     ||.    |.|....|.|||         |.|.| |...|
 Worm   157 -ENTTNFHILQYAMTGFGFDNANGDTFNE----TYREQIHIYYLKWRGERTQYEMFDFMFNKNGY 216

  Fly   183 RCDELFVADSCVFDETPYDCCKLFVREQT---VKGQC-------------------LVFNSMISE 225
            .|.:||  .:|......|:||.:|  :.|   ::|:|                   :.||:|.|.
 Worm   217 TCTDLF--QTCYGGSQTYNCCDIF--QPTYAMLRGRCFRLIDSYYQNDTDEVAKLSIFFNNMTSP 277

  Fly   226 NSRKKHLINQFYPHKLSTAGEDSGLKFTINASYSFMNNIDALTPFGMNLMIKEPRQWSNEMMYHL 290
                  ::|.....:|.....||.::..|...| ::|:.|                |:....|. 
 Worm   278 ------ILNTGVLPQLVLYNGDSNVEIGIYPRY-YLNSND----------------WNRVRFYQ- 318

  Fly   291 YPDTENFVAVHPLVTETSPNTYEMSPKKRRCYFDDEKNPTFQNTSLTYNRENCLVVCLHLVVWKT 355
                               .:..:.||...|..|    |.:|      .:..|.|....:.:.:.
 Worm   319 -------------------KSMILLPKSDGCSTD----PIYQ------GKFTCFVYKWLMQLIEQ 354

  Fly   356 CQCSLPAF---LPPIDGVPECGINDAQCLGNNSDIFTYVKMGDQEKYINDSRQGHFCDCPDNCNS 417
            ..|::|.:   |..:..||.|   :...:.||.:..:          :..|..|:  .|...| |
 Worm   355 YNCTVPYYKYTLSYLKDVPIC---EPDVIVNNFENIS----------LTPSTIGY--KCTSAC-S 403

  Fly   418 RLYEMSLNVRKLDY-PKNSTDQLIKAQVYYGQRVMTKIITKLKYTNIDLLANFGGIISLYIGASV 481
            |:.........:|. |..|....|:|...|.:....|.|...  :....::..||...|::|:||
 Worm   404 RIENTVTLATSIDTDPDPSYMFRIEASFTYLEYEQYKEIRTT--STAGFISELGGQAGLFVGSSV 466

  Fly   482 MSFIEL---LFV-LGKLMWGFIRDARIKLK 507
            |||::|   :|: :.|::..:.....|:::
 Worm   467 MSFVQLFNSVFIQIYKILRNYCNKKGIRVR 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk19NP_651708.2 ASC 39..489 CDD:279230 102/518 (20%)
AceK 116..>139 CDD:295079 1/22 (5%)
del-7NP_501276.4 ASC <434..473 CDD:295594 11/40 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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