DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk19 and del-1

DIOPT Version :9

Sequence 1:NP_651708.2 Gene:ppk19 / 43489 FlyBaseID:FBgn0039679 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_001355359.1 Gene:del-1 / 181534 WormBaseID:WBGene00000952 Length:694 Species:Caenorhabditis elegans


Alignment Length:622 Identity:111/622 - (17%)
Similarity:190/622 - (30%) Gaps:218/622 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 SNIHGMQHVFGEQHLWQRCLWLAIVLGAVITGFSLYTVLMHRHSEQLLVSLIETTQLPVYHIDFP 104
            :..||:..:|.....|.|.||:.:.|..:......::.:..::..:   ..|...:|......||
 Worm    80 TTFHGVNMIFTTSLYWVRFLWVVVSLVCICLCMYSFSHVKDKYDRK---EKIVNVELVFESAPFP 141

  Fly   105 AVAVCPWNHFNWQRAPSAFIRFLPRHPNAELRET---FRQLLASMDIMNFSNFNRIRILTKRNLT 166
            |:.||..|.|.     :...|.:|     |:.||   |.|.:.      :||     ..|...|:
 Worm   142 AITVCNLNPFK-----NHLARSVP-----EISETLDAFHQAVV------YSN-----DATMDELS 185

  Fly   167 GISYLKMTDLMNFMTYRCDELFVADSCV--------------------------FDETPYDCCKL 205
            |.....:.|..:|...:.:.::...|||                          .|.:.:.|...
 Worm   186 GRGRRSLNDGPSFKYLQYEPVYSDCSCVPGRQECIAQTSAPRTLENACICNYDRHDGSAWPCYSA 250

  Fly   206 FVREQTVKGQC------------------------------------------------------ 216
            ...|:::..:|                                                      
 Worm   251 QTWEKSICPECNDIGFCNVPNTTGSGNIPCYCQLEMGYCVFQPESRVRRIWEFQGNKIPEKGSPL 315

  Fly   217 ----------LVFNSM-----ISENSRKKHLINQ--FYPHKLSTAGE------------------ 246
                      |.:.:|     |:..:::|.::..  .:|.:.:..|.                  
 Worm   316 RKEYMEQLTQLGYGNMTDQVAITTQAKEKMILKMSGLHPQRRAALGYGKSELIKMCSFNGQQCNI 380

  Fly   247 DSGLKFTINAS----YSFMNNID-------ALTPFGMNLMIKEPRQWSNEMMYHLYPDTENF--- 297
            |:..|..|:.|    |:|..|.:       |...:|:.||:     :.|...|  .|.||..   
 Worm   381 DTEFKLHIDPSFGNCYTFNANPEKKLASSRAGPSYGLRLMM-----FVNSSDY--LPTTEATGVR 438

  Fly   298 VAVHPLVTETSPNTYEMS-------------------PKK-RRCYFDDEKNPTFQNTSL----TY 338
            :|:|.......|:|:..|                   |:. ..|...|  ||  |:.|:    .|
 Worm   439 IAIHGKEECPFPDTFGYSAPTGVISSFGISLRNINRLPQPYGNCLQKD--NP--QSRSIYKGYKY 499

  Fly   339 NRENCLVVCLHLVVWKTCQCSLPAFLPPIDGVPECGINDAQCLGNNSDIFTYVKMGDQEKYINDS 403
            ..|.|...|....:...|.|:.|.:       |:.....|.|...|:.....:.. :..|.....
 Worm   500 EPEGCFRSCYQYRIIAKCGCADPRY-------PKPWKRSAWCDSTNTTTLNCLTT-EGAKLSTKE 556

  Fly   404 RQGHFCDCPDNCNSRLYEMSLNVRKLDYPKNS----------------TDQLIKAQVYYGQRVMT 452
            .|.| |.|...|....|..:.:..|  :|..|                .:.....::||.|....
 Worm   557 NQKH-CKCIQPCQQDQYTTTYSAAK--WPSGSIQTSCDNHSKDCNSYLREHAAMIEIYYEQMSYE 618

  Fly   453 KIITKLKYTNIDLLANFGGIISLYIGASVMSFIELLF 489
            .:.....|:..:|:|:.||...|::|||:||.||.||
 Worm   619 ILRESESYSWFNLMADMGGQAGLFLGASIMSVIEFLF 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk19NP_651708.2 ASC 39..489 CDD:279230 109/620 (18%)
AceK 116..>139 CDD:295079 5/25 (20%)
del-1NP_001355359.1 deg-1 75..656 CDD:273309 111/622 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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