DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk19 and del-10

DIOPT Version :9

Sequence 1:NP_651708.2 Gene:ppk19 / 43489 FlyBaseID:FBgn0039679 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_495302.3 Gene:del-10 / 174069 WormBaseID:WBGene00020897 Length:1069 Species:Caenorhabditis elegans


Alignment Length:460 Identity:95/460 - (20%)
Similarity:157/460 - (34%) Gaps:137/460 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 EKLCNSFAHSNIHGMQHVFGEQHLWQRCLWLAIVLGAVITGFSLYTVLMHRHSE-QLLVSLIETT 94
            ::..::|..:|:..:.|:.....: .|.||..|::..||      .||:..:|: :|.:|....|
 Worm    69 KQFLDAFKDANMDAVHHLNAASPV-TRGLWCMIIIAFVI------LVLVQCYSQIKLYISEPVAT 126

  Fly    95 QLPVYH---IDFPAVAVCPWNHFNWQRAPSAFIRFLPRHPNA----------ELRETFRQLLASM 146
            .:...:   |.||.||:|..|.|........  |.:.|...:          ::...|..:|...
 Worm   127 NIEAEYPSKISFPTVAICNNNQFRLTYLTGG--RIMNRRSKSISGSLLSTGHDVESVFDTVLRKS 189

  Fly   147 DIMNFSNFNRIRILTK-RNLTGISYLKMTDLMNFMTYRCDELFVADSCVFDETPYDCCKL--FVR 208
            ..|:...|.|.....| |.:.|.::...|.                           |||  |..
 Worm   190 WDMDAVKFLRSAAHWKSRMILGCTWPNGTS---------------------------CKLSDFKA 227

  Fly   209 EQTVKGQCLVFNSMISENSRKKHLINQFYPHKLSTAGEDSGLKFTINA-SYSFMNNIDALTPF-- 270
            ..|..|.|...|:            :...|::::.:||..||:..:|. ||   ..:||.|..  
 Worm   228 VWTTTGLCWAINT------------DPHNPYEVTGSGEGHGLRLLLNVESY---ERVDACTKHFR 277

  Fly   271 -----GMNLMIKEPRQWSNEMMYHLYPDTE-NFVAVHPLVTETSPNTYEMS-PKKRR-------- 320
                 |:.::|.....         .||:. |.|.|        |:.|.|. |.|.:        
 Worm   278 TKTLPGLKILIYNQTD---------IPDSSMNGVNV--------PSGYSMDIPFKMQHRSKLTGV 325

  Fly   321 -CYFDDEKNPTFQNTSLTYNR-ENCLVVCLHLVVWKTCQCSLPAFLPPIDGVPECGINDAQCLGN 383
             |.   |:|......|..:|. ||...            |:|..::..::....|.:..|. ..|
 Worm   326 HCI---EENDEQIEASTDFNNPENIRT------------CTLRRYMTEVENSCHCTLRRAY-TSN 374

  Fly   384 NSDIFTYVKM---------GDQEKYINDSR-QGHFCDCPDNCNSRLYEMSLNVRKLDYPKNSTDQ 438
            ::|    |||         |..:|.:...| :|....|...|.|..|....::.:|  |:|....
 Worm   375 STD----VKMKACNVDQYFGCAQKAMQRIREEGTASTCLPPCKSIDYTAWQDMNRL--PQNLMPA 433

  Fly   439 LIKAQ 443
            ||:.|
 Worm   434 LIEEQ 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk19NP_651708.2 ASC 39..489 CDD:279230 94/452 (21%)
AceK 116..>139 CDD:295079 2/32 (6%)
del-10NP_495302.3 ASC 83..>419 CDD:279230 87/423 (21%)
ASC <789..849 CDD:279230
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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