DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk19 and Asic3

DIOPT Version :9

Sequence 1:NP_651708.2 Gene:ppk19 / 43489 FlyBaseID:FBgn0039679 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_006535700.1 Gene:Asic3 / 171209 MGIID:2159339 Length:563 Species:Mus musculus


Alignment Length:555 Identity:114/555 - (20%)
Similarity:197/555 - (35%) Gaps:159/555 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 PRGIKFREKLCNS----FAHS-NIHGMQHVFGEQHL-WQRCLWLAIVLGAVIT------------ 70
            |.|::..::...|    ||:| .:||:.|:||...| .:|.||...||.::..            
Mouse     4 PSGLEEAQRRQASDIRVFANSCTMHGLGHIFGPGGLTLRRGLWATAVLLSLAAFLYQVAERVRYY 68

  Fly    71 -GFSLYTVLMHRHSEQLLVSLIETTQLPVYHIDFPAVAVC-----------PWNHFNWQRAPSAF 123
             .|...|.|..|.|.||               .||||.:|           | |..:|  |.:|.
Mouse    69 GEFHHKTTLDERESHQL---------------TFPAVTLCNINPLRRSRLTP-NDLHW--AGTAL 115

  Fly   124 IRFLPRHPNAELRETFRQLLASMDIMNFSNFNRIRILTKRNLTGISYLKMTDLMNFMTYRCDELF 188
            :...|....|.|| ...|..|....|....|:..::..:   .|.|   :.|::....||     
Mouse   116 LGLDPAEHAAYLR-ALGQPPAPPGFMPSPTFDMAQLYAR---AGHS---LEDMLLDCRYR----- 168

  Fly   189 VADSCVFDETPYDCCKLFVREQTVKGQCLVFNSMISENSRKKHLINQFYPHKLSTAGEDSGLKFT 253
             ...|    .|.:...:|.|    .|||..|||    .::...|:.      ....|..:||:..
Mouse   169 -GQPC----GPENFTVIFTR----MGQCYTFNS----GAQGAELLT------TPKGGAGNGLEIM 214

  Fly   254 INASYS----FMNNIDALTPFGMNLMI-----KEPRQWSNEMMYHLYPDTENFVAVHPLVTETSP 309
            ::....    ...:::. |||.:.:.:     :||.. .:::.:...|..:.||:.........|
Mouse   215 LDVQQEEYLPIWKDMEE-TPFEVGIRVQIHGQEEPPA-IDQLGFGAAPGHQTFVSCQQQQLSFLP 277

  Fly   310 ------NTYEMSPKKRRCYFDDEKNPTF--QNTSLTYNRENCLVVCLHLVVWKTC---------- 356
                  ||..:.|.     ||.|.:...  .::|..|:...|.:.|....|.:.|          
Mouse   278 PPWGDCNTASVDPD-----FDPEPSDPLGSPSSSPPYSLIGCRLACESRYVARKCGCRMMHMPGN 337

  Fly   357 ----------QCSLPAF-------LPPIDGVPECGINDAQCLGNNSDIFTYVKMGDQEKYINDSR 404
                      .|:.||.       ||    ||.....|...||   .:..::.:...:..:....
Mouse   338 SPVCSPQQYKDCASPALGKAHLFSLP----VPIHSDIDHNPLG---QVLLFLALRPADAMLRKDT 395

  Fly   405 QGHFCDCPDNCNSRLYEMSLNVRKLDYPKNSTDQLI-----KAQVYYGQRVMT-----------K 453
                |.||:.|.:..|...|::.::  |..::.:.:     :::.|..:.|:.           .
Mouse   396 ----CVCPNPCATTRYAKELSMVRI--PSRASARYLARKYNRSETYITENVLVLDIFFEALNYEA 454

  Fly   454 IITKLKYTNIDLLANFGGIISLYIGASVMSFIELL 488
            :..|..|...:||.:.||.:.|:||||:::.:|:|
Mouse   455 VEQKAAYEVSELLGDIGGQMGLFIGASLLTILEIL 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk19NP_651708.2 ASC 39..489 CDD:279230 109/536 (20%)
AceK 116..>139 CDD:295079 7/22 (32%)
Asic3XP_006535700.1 ASC 21..546 CDD:383197 111/538 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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