DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk19 and asic2

DIOPT Version :9

Sequence 1:NP_651708.2 Gene:ppk19 / 43489 FlyBaseID:FBgn0039679 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_004918663.1 Gene:asic2 / 100492214 XenbaseID:XB-GENE-6033380 Length:541 Species:Xenopus tropicalis


Alignment Length:526 Identity:110/526 - (20%)
Similarity:195/526 - (37%) Gaps:148/526 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 SFAHSNIHGMQHV------FGEQHLWQRCLWLAIV--LGAVITGFS---LYTVLMHRHSEQLLVS 89
            |..|..:||::::      |..:..|    :||..  ||..::..|   ||.:....|:.   |.
 Frog    44 SLQHIKLHGLKYICSPKLAFRHRTFW----FLAFFTSLGFFLSWSSNRLLYWLSFPSHTR---VQ 101

  Fly    90 LIETTQLPVYHIDFPAVAVCPWNHFNWQRAPSAFIRF------------LPRHPNAEL-----RE 137
            |..:.:|.     ||||..|..|...:.|...:.:.|            ..|...|||     |:
 Frog   102 LEWSKELA-----FPAVTFCNNNPVRFHRLSKSDLYFAGYWLGLLFANRTARPMLAELLPEDRRK 161

  Fly   138 TFRQLLASMDIMNFSNFNRIRILTKRNLTGISYLKMTDLMNFMTYRCDELFVA-----DSCVFDE 197
            .|::|      .:|..|     |..||..|||    ...|:.:.::.:::.::     ::|    
 Frog   162 WFQKL------ADFRLF-----LPPRNFDGIS----VGFMDRLGHQLEDMLLSCKYRGEAC---- 207

  Fly   198 TPYDCCKLFVREQTVKGQCLVFNSMISENSRKKHLINQFYPHKLST--AGEDSGLKFTINASYSF 260
            .|::...:|.|    .|:|.:|||  .::.|.          .|:|  .|..:||:..::...  
 Frog   208 GPHNFSTVFTR----YGKCYMFNS--GQDGRP----------VLTTVKGGAGNGLEIMLDIQQ-- 254

  Fly   261 MNNIDALTPF-----------GMNLMI---KEPRQWSNEMMYHLYPDTENFVAVHPLVTETSPNT 311
                |...|.           |:.:.|   .|| .:..|:.:.:.|..:.|||     |:....|
 Frog   255 ----DEYLPIWGDTEETTFEAGVKVQIHSQSEP-PFIQELGFGVAPGFQTFVA-----TQEQRLT 309

  Fly   312 YEMSPKKRRCYFDDEKNPTFQNTSLTYNRENCLVVCLHLVVWKTCQCSLPAFLPPIDGVPECGIN 376
            |..|| ...|.|.:..:..|.    .|:...|.:.|....:.:.|.|.: ..:|  ...|.|...
 Frog   310 YLPSP-WGACRFSELGSDFFP----VYSISACRIDCETRYIVENCGCKM-VHMP--GDAPFCTPE 366

  Fly   377 D-AQCLGNNSDIFTYVKMGDQEKYINDSRQGHFCDCPDNCNSRLYEMSLNVRKLDYPKNSTDQLI 440
            . .:|.....|:..             .:.|..|.|...||...|...|::.|:  |..::.:.:
 Frog   367 QYKECAEPALDLLA-------------EKDGGNCVCTIPCNVTRYNKELSMVKI--PSKTSAKYL 416

  Fly   441 KAQVYYGQR-------VMTKIITKLKYTNID---------LLANFGGIISLYIGASVMSFIELLF 489
            :.:....::       |:......|.|..|:         ||.:.||.:.|:||||:::.:||..
 Frog   417 EKKFNKSEKYILDNILVLDVFFEALNYETIEQRKAYEVAGLLGDIGGQMGLFIGASILTILELFD 481

  Fly   490 VLGKLM 495
            .:.:|:
 Frog   482 YIYELI 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk19NP_651708.2 ASC 39..489 CDD:279230 108/515 (21%)
AceK 116..>139 CDD:295079 7/39 (18%)
asic2XP_004918663.1 ASC 49..497 CDD:383197 108/521 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.