DRSC/TRiP Functional Genomics Resources

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Protein Alignment ppk30 and Asic5

DIOPT Version :10

Sequence 1:NP_651706.1 Gene:ppk30 / 43487 FlyBaseID:FBgn0039677 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_071563.1 Gene:Asic5 / 63866 RGDID:69295 Length:495 Species:Rattus norvegicus


Alignment Length:527 Identity:107/527 - (20%)
Similarity:182/527 - (34%) Gaps:174/527 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KPEPSSEDNDD-DH--------------KESKKKLKKEGAGGWASTRRYARIPLKIMAALATVYV 56
            :|.||..|... ||              .:::.|::|.   .|.|.         ::.:::.:..
  Rat    26 RPLPSPTDRKKFDHDFAISTSFHGIHNIAQNQNKVRKV---IWLSV---------VLGSVSLLVW 78

  Fly    57 SILSS-ERYFYYWVQTSIERTDMHVSEIDFPAVTIIPINLSILKAEKLSK------AYNLVQSVV 114
            .|.|. ..||.:...||||  ..:|.:|:|||||.  .||:..:.|.:|:      .:::|..|:
  Rat    79 QIYSRLVNYFMWPTTTSIE--VQYVEKIEFPAVTF--CNLNRFQTEAVSRFGIIFFLWDIVSKVL 139

  Fly   115 WQTPMSARLT-----------DENF--TEFSELENWNAQSWGIY--QALQMNCQHFFTECQWRRK 164
            ....:|...|           ..||  |||       .::.|.|  ....::|:.|...|..:. 
  Rat   140 RLQEISGNNTGSPEALDFVASHRNFSITEF-------VKNNGFYLNHDTLVHCEFFGKTCDPKD- 196

  Fly   165 AMNCCDLFRPTKTFNGFAFEFN--------SLVS-SGRDETWPWSVASCGSYSGLNVKIKRQQGL 220
                   |:...|..|..|.||        :.|| |||               ||.:.:...|..
  Rat   197 -------FKHVFTEYGNCFTFNYGENVQSKNKVSVSGR---------------GLKLLLDVHQEE 239

  Fly   221 YTLNTM------GVI--VHEPTQL-----LGMSIDYSSEDRIVVPVEPLHFTAELDVRARPVQMR 272
            :|.|.:      |||  :|.|.:.     ||:|             .|:...|.:.:|    |::
  Rat   240 FTDNPVPGFADAGVIFVIHSPKKEPQFDGLGLS-------------SPVGMHARVTIR----QLK 287

  Fly   273 RCYFENEIPTGKSRSECIYKCHVNYIISKCNCSLELPVKATQDEDNIAAAKESNGRRICGVKDLA 337
            ..:  .|.|.|:...:...:....|  |...|..|...|..|              |:||     
  Rat   288 TIH--QEYPWGECNPDIKLRNFTTY--STYGCLKECKAKHIQ--------------RLCG----- 329

  Fly   338 CF------NQHRLSLFSMSNIIEESRDNV-------FSTVDCGCFPQCGHTQYHT----STY--- 382
            |.      |.....|....|.:....|::       ..|.:..|...|..|:|..    ||:   
  Rat   330 CLPFLLPGNGVECDLLKYYNCVSPILDHIERKGLCTMGTHNSSCPVPCEETEYPATIAYSTFPSQ 394

  Fly   383 --TEKMSAHTNLAA------AIEIDVYFQEETLFSYRSMLRFTLIDLMVSYGGIAGLIMGISVLG 439
              |:.::...|.:.      .:.|::.:.:......:.....::.:|:...||..||..|.|::.
  Rat   395 RATKFLAKKLNQSQEYIRENLVNIEINYSDLNYKITQQQKAVSVPELLADVGGQLGLFCGASLIT 459

  Fly   440 CINELLD 446
            .| |:::
  Rat   460 II-EIIE 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk30NP_651706.1 ASC 47..446 CDD:459966 97/470 (21%)
Asic5NP_071563.1 Binds the plasma membrane and stabilizes the channel in the closed state. /evidence=ECO:0000269|PubMed:27679529 1..30 1/3 (33%)
ASC 41..466 CDD:459966 101/512 (20%)
GAS motif, ion selectivity filter. /evidence=ECO:0000250|UniProtKB:P78348 454..456 1/1 (100%)

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