DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk30 and Asic3

DIOPT Version :9

Sequence 1:NP_001263076.1 Gene:ppk30 / 43487 FlyBaseID:FBgn0039677 Length:457 Species:Drosophila melanogaster
Sequence 2:XP_038963092.1 Gene:Asic3 / 286920 RGDID:708578 Length:564 Species:Rattus norvegicus


Alignment Length:489 Identity:98/489 - (20%)
Similarity:162/489 - (33%) Gaps:128/489 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 GAGG-------WASTRRYARIPLKIMAALATVYVSILSSERYF-YYWVQTSIERTDMHVSEIDFP 86
            |.||       ||:.         ::.:||.....:....||: .:..:|:::..:.|  ::.||
  Rat    35 GPGGLTLRRGLWATA---------VLLSLAAFLYQVAERVRYYGEFHHKTTLDERESH--QLTFP 88

  Fly    87 AVTIIPIN----------------LSILKAEKLSKAYNLVQSVVWQTPMSARLTDENFTEFSELE 135
            |||:..||                .::|..:....|..|  ..:.|.|...........:.::| 
  Rat    89 AVTLCNINPLRRSRLTPNDLHWAGTALLGLDPAEHAAYL--RALGQPPAPPGFMPSPTFDMAQL- 150

  Fly   136 NWNAQSWGIYQALQMNCQHFFTECQWRRKAMNCC--DLFRPTKTFNGFAFEFNSLVSSGRDETWP 198
                     |.....:.:....:|::|.:.   |  :.|....|..|..:.|||........|.|
  Rat   151 ---------YARAGHSLEDMLLDCRYRGQP---CGPENFTVIFTRMGQCYTFNSGAHGAELLTTP 203

  Fly   199 WSVASCGSYSGLNVKIKRQQGLY---------TLNTMGVIVH-----EPTQL--LGMSIDYSSED 247
                ..|:.:||.:.:..||..|         |...:|:.|.     ||..:  ||.......:.
  Rat   204 ----KGGAGNGLEIMLDVQQEEYLPIWKDMEETPFEVGIRVQIHSQDEPPAIDQLGFGAAPGHQT 264

  Fly   248 RIVVPVEPLHF---------TAELDVRARPVQMRRCYFENE--IPTGKSRSE---------CIYK 292
            .:....:.|.|         ||.||    |..     |:.|  .|.|..|..         |...
  Rat   265 FVSCQQQQLSFLPPPWGDCNTASLD----PDD-----FDPEPSDPLGSPRPRPSPPYSLIGCRLA 320

  Fly   293 CHVNYIISKCNCSL-----ELPVKATQD-EDNIAAAKESNGRRICGVKDLACFNQHRLSLFSMSN 351
            |...|:..||.|.:     ..||.:.|. :|..:.|.::..|:...|....|.........||..
  Rat   321 CESRYVARKCGCRMMHMPGNSPVCSPQQYKDCASPALDAMLRKDTCVCPNPCATTRYAKELSMVR 385

  Fly   352 IIEESRDNVFSTVDCGCFPQCGHTQYHTSTYTEKMSAHTNLAAAIEIDVYFQEETLFSYRSMLRF 416
            |                 |.....:|....|....|..|.  ..:.:|::|:.....:......:
  Rat   386 I-----------------PSRASARYLARKYNRSESYITE--NVLVLDIFFEALNYEAVEQKAAY 431

  Fly   417 TLIDLMVSYGGIAGLIMGISVLGCINELLDRFAC 450
            .:.:|:...||..||.:|.|:| .|.|:|| :.|
  Rat   432 EVSELLGDIGGQMGLFIGASLL-TILEILD-YLC 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk30NP_001263076.1 ASC 47..446 CDD:279230 90/459 (20%)
Asic3XP_038963092.1 ASC 17..547 CDD:413546 98/489 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.