DRSC/TRiP Functional Genomics Resources

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Protein Alignment ppk30 and mec-4

DIOPT Version :9

Sequence 1:NP_001263076.1 Gene:ppk30 / 43487 FlyBaseID:FBgn0039677 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_510712.2 Gene:mec-4 / 181728 WormBaseID:WBGene00003168 Length:768 Species:Caenorhabditis elegans


Alignment Length:313 Identity:64/313 - (20%)
Similarity:121/313 - (38%) Gaps:59/313 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 RRKAMNCCDLFRPTKTFNGFAFEFNSLVSSGRDETWPWSVASCGSYS---GLNVKIKRQQGLYTL 223
            :|:.::.|       :|||.|.:..:...:..|..:    .||.:::   .:|:...|...:|.|
 Worm   443 KRELVHKC-------SFNGKACDIEADFLTHIDPAF----GSCFTFNHNRTVNLTSIRAGPMYGL 496

  Fly   224 NTMGVIVH-----EPTQLLGMSIDYSSEDRIVVP-----VEPLHFTAELDVRARPVQMRRCYFEN 278
            . |.|.|:     ..|:..|:.:....::....|     ..|..:.:...:|.|.:......:.:
 Worm   497 R-MLVYVNASDYMPTTEATGVRLTIHDKEDFPFPDTFGYSAPTGYVSSFGLRLRKMSRLPAPYGD 560

  Fly   279 EIPTGKSRSECIYKCHVNYIISKC--NCSLELPVKATQDEDNIAAAKESNGRRICGVKDLACFNQ 341
            .:|.||: |:.||. :..|.:..|  :|..:|.:|..:..|......|:  .|.|...|...   
 Worm   561 CVPDGKT-SDYIYS-NYEYSVEGCYRSCFQQLVLKECRCGDPRFPVPEN--ARHCDAADPIA--- 618

  Fly   342 HRLSLFSMSNIIEESRDNVFSTVDCGCFPQCGHTQYHTSTYT----EKMSAHTNLAA----AIEI 398
             |..|.:..|.:    ..:..:..|.|...|..:.| :.||:    ..:|....|.:    |:|.
 Worm   619 -RKCLDARMNDL----GGLHGSFRCRCQQPCRQSIY-SVTYSPAKWPSLSLQIQLGSCNGTAVEC 677

  Fly   399 DVYFQE-----ETLFSYRSMLRFT------LIDLMVSYGGIAGLIMGISVLGC 440
            :.:::|     |..:...:....|      .::|:..:||..||..|||.|.|
 Worm   678 NKHYKENGAMVEVFYEQLNFEMLTESEAYGFVNLLADFGGQLGLWCGISFLTC 730

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk30NP_001263076.1 ASC 47..446 CDD:279230 64/313 (20%)
mec-4NP_510712.2 deg-1 86..736 CDD:273309 64/313 (20%)
ASC 87..>172 CDD:279230
ASC <428..739 CDD:295594 64/313 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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