DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk30 and scnn1gl

DIOPT Version :9

Sequence 1:NP_001263076.1 Gene:ppk30 / 43487 FlyBaseID:FBgn0039677 Length:457 Species:Drosophila melanogaster
Sequence 2:XP_017947701.2 Gene:scnn1gl / 101734161 XenbaseID:XB-GENE-22061126 Length:481 Species:Xenopus tropicalis


Alignment Length:457 Identity:93/457 - (20%)
Similarity:163/457 - (35%) Gaps:134/457 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 YFYYWVQTSIERTDMHVSEIDFPAVTIIPINLSILKAEKLSKAYNLVQSVVWQTPMSARL----- 123
            :..|..|..:  |.::.:.:.|||:|...:|.:.:.....||..:|.:.:.:.:...:..     
 Frog    12 FLRYPTQEKV--TLVNSARLPFPAITFCNLNRARMSKLNSSKYQSLTEYLSFTSGNESEEGSISH 74

  Fly   124 -TDENFTEFSELENWNAQSWGIYQALQMNCQHFFTECQWRRKAMNC------CDLFRPTKTFN-- 179
             .|.||| |: |.....|.       ||...|     |.....::|      |:....|...|  
 Frog    75 GRDRNFT-FA-LSQLTPQE-------QMELGH-----QLENMLISCIFHDEVCNESFFTPFLNPK 125

  Fly   180 -GFAFEFNSLVSSGRDET----WP-------WSVASCGSYSGLNVKIKRQQGLY--TLNT---MG 227
             |..:.||     ||.:.    |.       .:....|...||.:::..:|..|  :|:|   :.
 Frog   126 LGICYTFN-----GRRQADLQHWQNYQQEEYLNATKAGFSYGLTMELFIEQSEYISSLSTTAGLR 185

  Fly   228 VIVHEPTQLLGMSIDYSSEDRIVVPVEPLHFTAELDVRARPVQMRR--------CYFENEI---- 280
            |::|...::     .:..::.:.||.     ..|.|:....|.::|        |...|:|    
 Frog   186 VVLHGQGKM-----PFPEDEGVNVPP-----GQESDIGIVKVHVKRLQEPYSSKCSNGNDIRNFY 240

  Fly   281 ----PTGKSRSECIYKCHVNYIISKCNCSL-ELPVKATQDEDNIAAAKESNGRRI--CGVKDLA- 337
                .|..||..|...|....:|..|.|.: |.|              |..|..:  |.:.:.: 
 Frog   241 TDVYGTDYSRETCKKSCAQAKMIKNCGCRMWEFP--------------EPPGSNVPLCNISEPSV 291

  Fly   338 --CFNQHRLSLFSMSNIIEESRDNVFSTVDCGCFPQC---------GHTQYHTSTY----TEKMS 387
              |...:...|         |.|.    :.|.|..||         ..:|:.:|.|    |:::.
 Frog   292 NHCVEMYEYKL---------SHDQ----LKCHCPLQCEEEIFELTLSSSQWPSSMYLDSFTKRLQ 343

  Fly   388 AHTNLAAA-------IEIDVYFQEETLFSYRSMLRFTLIDLMVSYGGIAGLIMGISVLGC-INEL 444
            :.....:|       :::.||:|:........:....|:||..|.||:.||.:|:||  | :.|.
 Frog   344 SRKGFQSAQSIRDNVVKVVVYYQQLNYELIEEVPSMQLVDLFSSIGGLVGLWIGVSV--CTVAEF 406

  Fly   445 LD 446
            |:
 Frog   407 LE 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk30NP_001263076.1 ASC 47..446 CDD:279230 92/455 (20%)
scnn1glXP_017947701.2 ASC 1..450 CDD:413546 93/457 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.