DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk30 and asic1

DIOPT Version :9

Sequence 1:NP_001263076.1 Gene:ppk30 / 43487 FlyBaseID:FBgn0039677 Length:457 Species:Drosophila melanogaster
Sequence 2:XP_004912018.1 Gene:asic1 / 100489966 XenbaseID:XB-GENE-977699 Length:525 Species:Xenopus tropicalis


Alignment Length:460 Identity:99/460 - (21%)
Similarity:162/460 - (35%) Gaps:126/460 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 SERYFYYWVQTSIERTDMHVSEID--------FPAVTIIPIN------------------LSILK 99
            :||..||:...       ||:::|        |||||...:|                  ||:  
 Frog    61 TERIIYYFEYP-------HVTKLDEISTPRMIFPAVTFCNLNEFRFSRVTKNDLYHAGELLSL-- 116

  Fly   100 AEKLSKAYNLVQSVVWQTPMSARLTDE-NFTEFSELENWNAQSWGIYQALQMNCQHFFTECQWRR 163
               |:..|.|..|.:....:...|.|: ||..|.. :.:|.:.:  |.....:.:.....|::|.
 Frog   117 ---LNNRYELPDSQLADEKVMEILQDKANFRNFKP-KPFNMREF--YDRTGHDIREMLLSCKYRG 175

  Fly   164 KAMNCCDLFRPTKTFNGFAFEFNSLVSSGRDETWPWSVASCGSYSGLNVKIKRQQGLYTLNTMGV 228
            :..:..| |.|..|..|..:.||    |||:...|......|:.:||.:.:..||..| |...|.
 Frog   176 EECSVDD-FVPVFTRYGKCYTFN----SGRNGRSPLVTTKGGTGNGLELMLDIQQDEY-LPVWGE 234

  Fly   229 IVHEPTQLLGMSIDYSSEDRIVVPVEPLHFTAELDVRARP--------VQMRRCY---------- 275
             ..|.:...|:.:...|:|      || .|..:|.....|        .:.|..|          
 Frog   235 -TDETSFEAGIKVQIHSQD------EP-PFIDQLGFGVAPGFQTFVSCQEQRLTYLPPPWGDCKS 291

  Fly   276 --FENEIPTGKSRSECIYKCHVNYIISKCNCSL-ELPVKATQDEDNIAAAKESNGRRICGVKDLA 337
              .::|.....|.|.|...|...|::..|||.: .:|..|......:  .||             
 Frog   292 SAMDSEFFDTYSISACRIDCETRYLVENCNCRMVHMPGDAAYCTPEL--YKE------------- 341

  Fly   338 CFNQHRLSLFSMSNIIEESRDNVFSTVDCGCFPQCGHTQYHTSTYTEKMSAHTN---LAA----- 394
            |.:.      ::..::|  :||.|    |.|...|..|:|.......|:.:..:   ||.     
 Frog   342 CADP------ALDFLVE--KDNDF----CVCETPCNMTRYGKELSMVKIPSKASARYLAKKYNKS 394

  Fly   395 -------AIEIDVYFQEETLFSYRSMLRFTLIDLMVSYGGIAGLIMGISVLGCINELLD------ 446
                   .:.:|::|:.....:......:.:..|:...||..||.:|.|:| .:.||.|      
 Frog   395 EQYIAENILVLDIFFEALNYETIEQKKAYEVAGLLGDIGGQMGLFIGASIL-TVLELFDYAYEVL 458

  Fly   447 RFACC 451
            |:..|
 Frog   459 RYKLC 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk30NP_001263076.1 ASC 47..446 CDD:279230 96/447 (21%)
asic1XP_004912018.1 ASC 18..507 CDD:413546 99/460 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.