DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk30 and scnn1g

DIOPT Version :9

Sequence 1:NP_001263076.1 Gene:ppk30 / 43487 FlyBaseID:FBgn0039677 Length:457 Species:Drosophila melanogaster
Sequence 2:XP_031749443.1 Gene:scnn1g / 100487822 XenbaseID:XB-GENE-980897 Length:672 Species:Xenopus tropicalis


Alignment Length:552 Identity:106/552 - (19%)
Similarity:191/552 - (34%) Gaps:191/552 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 RRYARIPLKIMAALATVY---VSILSSERYFYYWVQTSIERTDMHVSEIDFPAVTIIPIN----- 94
            ||:..|.| .:.|:|.::   ..:|.|    ||.|..||..|   ..::.||||||..:|     
 Frog    63 RRWIWIVL-TLCAVALIFWQCALLLMS----YYSVSASITVT---FQKLVFPAVTICNLNPYSYS 119

  Fly    95 -----LSILKAE---KLSKAYNLVQSVV------------------------------------- 114
                 ||.|:.|   .|...|...:.:|                                     
 Frog   120 KIKDRLSALERETSQTLKNIYGFTEPLVRSKRDVEVDENSTDIFIKQIPLYRLESVQGNQLVVSD 184

  Fly   115 ----WQTPMSA-------------------RLTDEN----FTEFSELENWNA-QSW--------- 142
                .:|.|||                   :|.|.|    .|.|:.....|| |.|         
 Frog   185 LKTKKRTRMSAKVIHRDAESVQDPGNMVGFKLCDPNNSSDCTIFTFSSGVNAIQEWYRLHYTNVL 249

  Fly   143 -----------GIYQALQMNCQHFF--TECQWRRKAMNCCDLFRPTKTFNGFAFEFNSLVSS--- 191
                       | |:|.::....||  ..|..|...:....|:....|||. |...|.||||   
 Frog   250 AKISMEDKIAMG-YKADELIVTCFFDGLSCDARNFTLFHHPLYGNCYTFNS-AERGNLLVSSMGG 312

  Fly   192 -----------GRDETWPWSVASCGSYSGLNVKIKRQQGLYTLNTMGVIVHEPTQL-LGMSIDYS 244
                       ..||..|:    ..:.:|..:.:..|.....:..:|..:...|:. :||.:..|
 Frog   313 AEYGLKVVLYIDEDEYNPY----LSTAAGAKILVHDQDEYPFIEDLGTELETATETSIGMQLTES 373

  Fly   245 SE----------DRIVVPVEPLH---FTAELDVRA--RPVQMRRC---YFENEIPTGKSRSECIY 291
            ::          |...|.||.|:   :|.::.:.:  :...:|.|   :::..:|.|  ...|.|
 Frog   374 TKLSDPYSDCTMDGSDVSVENLYSKKYTLQICLNSCFQREMVRTCGCAHYDQPLPNG--AKYCNY 436

  Fly   292 KCHVNYIISKCNCSLELPVKATQDEDNI-AAAKESNGRRICGVKDLACFNQHRLSLFSMSNIIEE 355
            :.:.::|.    |..:|..:..|:|... :|.:||     |..|:           ::::..:.:
 Frog   437 EEYPSWIY----CYFKLYKQFVQEELGCQSACRES-----CSFKE-----------WTLTRSLAK 481

  Fly   356 SRDNVFSTVDCGCFPQCGHTQYHTSTYT----EKMSAHTNLAAAIEIDVYFQEETLFSYRSMLRF 416
                         :|.....|:.....:    ||::.:........:::::|:....|......:
 Frog   482 -------------WPSLNSEQWMLRVLSWELGEKLNKNLTKNDLANLNIFYQDLNSRSISESPTY 533

  Fly   417 TLIDLMVSYGGIAGLIMGISVLGCINELLDRF 448
            .::.|:.::||..||.|..|:: |:.|:::.|
 Frog   534 NIVTLLSNFGGQLGLWMSCSMI-CVLEIVEVF 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk30NP_001263076.1 ASC 47..446 CDD:279230 101/539 (19%)
scnn1gXP_031749443.1 ENaC 35..651 CDD:273304 106/552 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.