DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk20 and asic4b

DIOPT Version :10

Sequence 1:NP_651705.2 Gene:ppk20 / 43486 FlyBaseID:FBgn0039676 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_999951.1 Gene:asic4b / 407667 ZFINID:ZDB-GENE-040513-6 Length:558 Species:Danio rerio


Alignment Length:621 Identity:131/621 - (21%)
Similarity:215/621 - (34%) Gaps:194/621 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AKGDNSVKPTEAAGFG-------DNERCLADLLKVHFRSYCEKSTIH-CVRYLYDSHLHNLERFV 58
            |||.:    ||..|.|       ..:..:|||     .|:...|::| ..|.|..|     ||  
Zfish    17 AKGAS----TEGGGTGMLDEGLRRQKEGMADL-----ASFASSSSLHGLARALGTS-----ER-- 65

  Fly    59 VYPLFISTFNFKLYIIIVFRIIWSMLLIISIGLSFFFYLLLSERFVSQKLQTVVHDPQFPVFL-- 121
                    ..|:       :.:|.:.|::|:||  |.|.      .:....|.:..|......  
Zfish    66 --------LGFR-------QTLWGLALLVSLGL--FLYQ------ATWSAATYLERPHLAALREE 107

  Fly   122 ----VPFPAVGICTDNRINWNKLEAAKEQFLPTNASVELVESFTVLVSRMETLRFGSYLSSLAEL 182
                :.|||:.:|..||..::.|         |:|.:..:.:.|.|..:.   |.|...|.| :.
Zfish   108 TRRELTFPAITLCNVNRFRFSAL---------TDADIYHLANLTGLPPKS---RKGHRPSEL-QY 159

  Fly   183 EDDNLEAVGFVNLTELAIFMTL--QCSDIMVPKSCLWRSSSFNC-CEYFVLEKTEFGFCLVFNSE 244
            ...|:          |.||...  |..|::  |||  ..|..|| .|.|.:..|.:|.|..||  
Zfish   160 PPPNM----------LDIFQRTGHQLEDML--KSC--NFSGQNCSSEDFSVVYTRYGKCYTFN-- 208

  Fly   245 VSPRSKAIKQKEGNNFYPRHNAKAGQSTGLNFDLILNESFRRP--------DSQANNNVYVSICQ 301
                        ||...|:...:.|...||...|.:.:....|        ..:|...|.:....
Zfish   209 ------------GNKTSPKRVRQGGTGNGLEMMLDIQQDEYLPIWRETNETTLEAGIRVQIHSQN 261

  Fly   302 APDQLNNVVYSITQNTETYVTVR-PGLTWTDNTTRSIPPERRNCLFADEQGELDANDSAKNFGKP 365
            .|..::.:.:.::...:|:|:.: ..||:       :|....||. |..:..:...|:       
Zfish   262 EPPYIHQLGFGVSPGFQTFVSCQEQRLTY-------LPQPWGNCR-ASSEPVIPGYDT------- 311

  Fly   366 FQLSNCLNRCHESYLIQLCNCSLPIFFLYNHRVPD---CNAVSLRCLARHNDIFSYDKRRDEDAL 427
            :.:|.|...|..:.:.:.|||.:.      |...|   |....::|:         ||     ||
Zfish   312 YSVSACRLHCESTQVQRECNCRMV------HMPGDADICAPSKIKCV---------DK-----AL 356

  Fly   428 FSATK-LGMTCSCLVDCYLLDYYTSTTTLPLSAHKLP--------KDPHQK--------LFRVDV 475
            .|..| .|.:|.|...|.|..|...     ||..|:|        ...:||        ...:|:
Zfish   357 ASLQKSTGDSCPCETPCNLTRYGKE-----LSMVKIPSRGSARYLSRKYQKSEEYIRDNFLILDI 416

  Fly   476 HYQVETTPLYRTSLEFTIIDLIANLGGIFGLCLGASMVSAFELIYYLTVGLAMHLYDHQYYGVLF 540
            .::............:.|..|:.::||..||.:|||:::..|::.|:             |.|  
Zfish   417 FFEALNYETIEQKKAYDIAGLLGDIGGQMGLFIGASILTILEILDYI-------------YEV-- 466

  Fly   541 KHLKAKWVNLKGYLRNEVGHLAENPAAHKDTNDRKL 576
                         .:|::..|.:...:.|.||.|.|
Zfish   467 -------------AKNKIKQLLKPKKSQKQTNQRNL 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk20NP_651705.2 ASC 34..521 CDD:459966 110/525 (21%)
asic4bNP_999951.1 ENaC 54..497 CDD:273304 119/575 (21%)
GAS motif, ion selectivity filter. /evidence=ECO:0000250|UniProtKB:P78348 450..452 1/1 (100%)

Return to query results.
Submit another query.