DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk21 and Asic4

DIOPT Version :9

Sequence 1:NP_651704.2 Gene:ppk21 / 43485 FlyBaseID:FBgn0039675 Length:550 Species:Drosophila melanogaster
Sequence 2:NP_071570.2 Gene:Asic4 / 63882 RGDID:621068 Length:539 Species:Rattus norvegicus


Alignment Length:522 Identity:115/522 - (22%)
Similarity:188/522 - (36%) Gaps:109/522 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 LKDYAAESSVHGIRYLADPKMRNYLNIRVIWLLILLTTSIGAIVVYVDLNELYQTVRIQTTIKNT 112
            |..:|:.|::||:.....|......  |.:|:|.|||:....:.....|...|.| |......:.
  Rat    42 LATFASTSTLHGLGRACGPGPHGLR--RTLWVLALLTSLAAFLYQAASLARGYLT-RPHLVAMDP 103

  Fly   113 MLPIFRIPFPSIGLCPRNRLNWKILETEAVDHFLGANVSA-AQKDLFVKFFTAAGDPHLS---RL 173
            ..|.....||::.||..||.....|....:.|.  ||::. ..||         .|.|.:   |.
  Rat   104 AAPAPVAGFPAVTLCNINRFRHSALSDADIFHL--ANLTGLPPKD---------RDGHRAAGLRY 157

  Fly   174 NEMSNFFGNKTLTDELHMLDHLDLREVYKFIQFRCQDLFHTCRWRGNPVNCCEVIEYQ--FTEAG 236
            .|       ..:.|.|:...|            :..|:..:|.:.|:.   |....:.  :|..|
  Rat   158 PE-------PDMVDILNRTGH------------QLADMLKSCNFSGHH---CSASNFSVVYTRYG 200

  Fly   237 LCFVFNTEISPASRQKAREDKYYPLRTPHYGEGSGLDLFLRLNRSFIRPGKR---------GINV 292
            .|:.||.:  |.|...:|..          |.||||::.|.:.:....|..|         ||.|
  Rat   201 KCYTFNAD--PQSSLPSRAG----------GMGSGLEIMLDIQQEEYLPIWRETNETSFEAGIRV 253

  Fly   293 MIKQPQQWSDVVRHVPHEAHTRISITP---RFTVTDERTRTVTPE-IRRCIFGDEVDNPHYKNFP 353
            .|...::       .|:.......::|   .|....|:..|..|: ...|....::..|..:.:.
  Rat   254 QIHSQEE-------PPYIHQLGFGVSPGFQTFVSCQEQRLTYLPQPWGNCRAESKLREPELQGYS 311

  Fly   354 DFEYWVGNCRSRCHQEHVLNLCK------------CSPSIFFPISDKDNFTACKASDFKCLYDNR 406
              .|.|..||.||.:|.||..|.            |.|:|:...:|....:....|:..|.... 
  Rat   312 --AYSVSACRLRCEKEAVLQRCHCRMVHMPGNETICPPNIYIECADHTLDSLGGGSEGPCFCPT- 373

  Fly   407 FTFSIERHPEEDDFVKNPFKESMICDCFTSCSQLVFDRVFTTTTLDNNETDTEAGTMRLDIFYQS 471
             ..::.|:.:|...||.|.:.|               ..:.....:.|||......:.||:|:::
  Rat   374 -PCNLTRYGKEISMVKIPNRGS---------------ARYLARKYNRNETYIRENFLVLDVFFEA 422

  Fly   472 GWFIQYQTNMRFTFVELLASFGGIIGLFLGASLLSAFE-LAYYFSIGLYLYIHGKRKLRKPEPGV 535
            ......:....:....||...||.:|||:|||:|:..| |.|.:.:.   :...||..|:|:..:
  Rat   423 LTSEAMEQRAAYGLSALLGDLGGQMGLFIGASILTLLEILDYIYEVS---WDRLKRVWRRPKTPL 484

  Fly   536 LT 537
            .|
  Rat   485 RT 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk21NP_651704.2 ASC 51..513 CDD:279230 108/493 (22%)
Asic4NP_071570.2 ASC 40..488 CDD:295594 115/522 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 501..531
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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