DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk21 and Asic3

DIOPT Version :9

Sequence 1:NP_651704.2 Gene:ppk21 / 43485 FlyBaseID:FBgn0039675 Length:550 Species:Drosophila melanogaster
Sequence 2:XP_038963092.1 Gene:Asic3 / 286920 RGDID:708578 Length:564 Species:Rattus norvegicus


Alignment Length:564 Identity:116/564 - (20%)
Similarity:193/564 - (34%) Gaps:152/564 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 KSGLIQTQRDARKNSRLGKLWHFMLPYLKDYAAESSVHGIRYLADP---KMRNYLNIRVIWLLIL 82
            :|||.:.||....:.|:             :|:..::||:.::..|   .:|     |.:|...:
  Rat     4 RSGLEEAQRRQASDIRV-------------FASSCTMHGLGHIFGPGGLTLR-----RGLWATAV 50

  Fly    83 LTTSIGAIVVYVDLNELYQTVRIQTTIKNTMLPIFRIPFPSIGLCPRNRLNWKILETEAVDHFLG 147
            |.:....:....:....|.....:||:...  ...::.||::.||..|.|....|....: |:.|
  Rat    51 LLSLAAFLYQVAERVRYYGEFHHKTTLDER--ESHQLTFPAVTLCNINPLRRSRLTPNDL-HWAG 112

  Fly   148 ANVSAAQKDLFVKFFTAAGDPHLSRLNEMSNFFGNKTLTDELHMLDHLDLREVYKFIQFRCQDLF 212
            ..:..........:..|.|.|...     ..|..:.|          .|:.::|.......:|:.
  Rat   113 TALLGLDPAEHAAYLRALGQPPAP-----PGFMPSPT----------FDMAQLYARAGHSLEDML 162

  Fly   213 HTCRWRGNPVNCC--EVIEYQFTEAGLCFVFNTEISPASRQKAREDKYYPLRTPHYGEGSGLDLF 275
            ..||:||.|   |  |.....||..|.|:.||:....|..          |.||..|.|:||::.
  Rat   163 LDCRYRGQP---CGPENFTVIFTRMGQCYTFNSGAHGAEL----------LTTPKGGAGNGLEIM 214

  Fly   276 LRLNRSFIRPGKRGINVMIKQPQQWSDVVRHVPHEAHTRISITPRFTVTDERTRTVTPEIRRCIF 340
            |.:.:....|             .|.| :...|.|...|:.|..:    ||     .|.|.:..|
  Rat   215 LDVQQEEYLP-------------IWKD-MEETPFEVGIRVQIHSQ----DE-----PPAIDQLGF 256

  Fly   341 G-----------------------------------------DEVDNPHYKNFPDFEYWVGNCRS 364
            |                                         |.:.:|..:..|.:.. :| ||.
  Rat   257 GAAPGHQTFVSCQQQQLSFLPPPWGDCNTASLDPDDFDPEPSDPLGSPRPRPSPPYSL-IG-CRL 319

  Fly   365 RCHQEHVLNLCKCSPSIFFPISDKDNFTACKASDFK-CLYDNRFTFSIERHPEEDDFVKNPFKES 428
            .|...:|...|.|. .:..|    .|...|....:| |           ..|..|..::   |::
  Rat   320 ACESRYVARKCGCR-MMHMP----GNSPVCSPQQYKDC-----------ASPALDAMLR---KDT 365

  Fly   429 MIC--DCFTS--CSQLVFDRV-------FTTTTLDNNETDTEAGTMRLDIFYQSGWFIQYQTNMR 482
            .:|  .|.|:  ..:|...|:       :.....:.:|:......:.||||:::..:...:....
  Rat   366 CVCPNPCATTRYAKELSMVRIPSRASARYLARKYNRSESYITENVLVLDIFFEALNYEAVEQKAA 430

  Fly   483 FTFVELLASFGGIIGLFLGASLLSAFE-LAYYFSIGLYLYIHGK 525
            :...|||...||.:|||:|||||:..| |.|...:|.....||:
  Rat   431 YEVSELLGDIGGQMGLFIGASLLTILEILDYLCEVGKNPRHHGE 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk21NP_651704.2 ASC 51..513 CDD:279230 106/520 (20%)
Asic3XP_038963092.1 ASC 17..547 CDD:413546 111/551 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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