DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk21 and Scnn1b

DIOPT Version :9

Sequence 1:NP_651704.2 Gene:ppk21 / 43485 FlyBaseID:FBgn0039675 Length:550 Species:Drosophila melanogaster
Sequence 2:NP_036780.1 Gene:Scnn1b / 24767 RGDID:3640 Length:638 Species:Rattus norvegicus


Alignment Length:608 Identity:110/608 - (18%)
Similarity:188/608 - (30%) Gaps:193/608 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 YAAESSVHGIRYL--ADPKMRNYLNIRVIWLLILLTTSIGAIVVYVDLNELYQTVRIQTTIKNTM 113
            |...::.||.:.:  ..||.      :.:|.|:   |.:.|.:|........||........:..
  Rat    29 YCNNTNTHGPKRIICEGPKK------KAMWFLL---TLLFACLVCWQWGVFIQTYLSWEVSVSLS 84

  Fly   114 LPIFRIPFPSIGLCPRNRLNWKILETEAVDHFLGANVSAAQKDLFVKFFTAAGD----PHLSRLN 174
            :....:.||::.:|     |....:...|.|.|        |||: |...|..|    |..|..|
  Rat    85 MGFKTMNFPAVTVC-----NSSPFQYSKVKHLL--------KDLY-KLMEAVLDKILAPKSSHTN 135

  Fly   175 EMS--------------------------NFFG----------------------------NKTL 185
            ..|                          |.||                            |.|:
  Rat   136 TTSTLNFTIWNHTPLVLIDERNPDHPVVLNLFGDSHNSSNPAPGSTCNAQGCKVAMRLCSANGTV 200

  Fly   186 ------------TDELHMLDHLDLREVYKFIQFRCQDL----------FHTCRWRGNPVNCCEVI 228
                        ..|.::|...::     |.|...|||          ...|.:...|.:.....
  Rat   201 CTFRNFTSATQAVTEWYILQATNI-----FSQVLPQDLVGMGYAPDRIILACLFGTEPCSHRNFT 260

  Fly   229 EYQFTEAGLCFVFNTEISPASRQKAREDKYYPLR----------TPHYGEGSGLDLFLRLNRS-- 281
            ...:.:.|.|::||..::..:...|.....:.|:          .|.....:|..|.|...|:  
  Rat   261 PIFYPDYGNCYIFNWGMTEKALPSANPGTEFGLKLILDIGQEDYVPFLASTAGARLMLHEQRTYP 325

  Fly   282 FIRPGKRGINVMIKQPQQWSDVVRHVPHEAHTRISITPRFTVTDERTRTVTPEIRRCIF-GDEVD 345
            |||  :.||..|                 |.|..||.........:....:|    |.. |.:|.
  Rat   326 FIR--EEGIYAM-----------------AGTETSIGVLLDKLQGKGEPYSP----CTMNGSDVA 367

  Fly   346 NPHYKNFPDFEYWVGNCRSRCHQEHVLNLCKCSPSIF-FPISDKDNFTACKASDFKCLYDNRFTF 409
            ..:..:..:..|.:..|...|.|:|:::.|.|...:: .|..:|    .|...||.   |..:.:
  Rat   368 IQNLYSDYNTTYSIQACLHSCFQDHMIHNCSCGHYLYPLPAGEK----YCNNRDFP---DWAYCY 425

  Fly   410 -SIERHPEEDDFVKNPFKESMICDCFTSCSQLVFDRVFTTTTLD--------------------- 452
             |::....:        :|:.:..|..||:...:.  .|.:..|                     
  Rat   426 LSLQMSVVQ--------RETCLSMCKESCNDTQYK--MTISMADWPSEASEDWILHVLSQERDQS 480

  Fly   453 NNETDTEAGTMRLDIFYQSGWFIQYQTNMRFTFVELLASFGGIIGLFLGASLLSAFELA------ 511
            :|.|.:..|.::|:|::|...:...:.:.....|.||::.||..|.::|.|:|...|..      
  Rat   481 SNITLSRKGIVKLNIYFQEFNYRTIEESPANNIVWLLSNLGGQFGFWMGGSVLCLIEFGEIIIDF 545

  Fly   512 -YYFSIGLYLYIHGKRKLRKPEP 533
             :...|.|.....|.|:.|...|
  Rat   546 IWITVIKLVASCKGLRRRRPQRP 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk21NP_651704.2 ASC 51..513 CDD:279230 104/586 (18%)
Scnn1bNP_036780.1 ENaC 21..621 CDD:273304 110/608 (18%)
deg-1 29..538 CDD:273309 103/576 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 598..620
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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