DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk21 and del-4

DIOPT Version :9

Sequence 1:NP_651704.2 Gene:ppk21 / 43485 FlyBaseID:FBgn0039675 Length:550 Species:Drosophila melanogaster
Sequence 2:NP_492230.2 Gene:del-4 / 189033 WormBaseID:WBGene00012116 Length:527 Species:Caenorhabditis elegans


Alignment Length:533 Identity:112/533 - (21%)
Similarity:194/533 - (36%) Gaps:100/533 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LGKLWHFMLPYLKDYAAESSVHGIRYLADPKMRNYLNIRVIWLLILLTTSIGAIVVYVDLNELYQ 101
            :|..|..:.....|::..:|.||:.::.   |.|...:|..|:|:::.:....|..::.|...|.
 Worm     1 MGVFWTGLKYVFTDFSCWTSTHGVPHIG---MANARWLRAFWILVVVVSIALFIWQFITLLTNYL 62

  Fly   102 TVRIQTTIKNTMLPIFRIPFPSIGLCPRNRLNWKILETEAVDHFLGANVSAAQKDLFVKFFTAAG 166
            :..:.|   .|.|......||::.:|..|  .||:.||::||..:.|.:.|...|.....|....
 Worm    63 SFSVNT---ETTLQFAERTFPTVTICHLN--PWKLSETKSVDPDMSALIDAYNSDSSSAQFGLPA 122

  Fly   167 DPHLSRLNEMSNFFGNKTL--TDELHMLDHLDLREVYKFIQFRCQDLFHTCRWRGNPVNCCEVIE 229
            .....|..:.|.:    ||  ::.|:...:.|..:    |.:...|:..:|.:.....|..:..:
 Worm   123 SLTADRQQQASKW----TLMYSERLNEKQYNDAAD----IAYSYDDMVVSCTYNAKTCNITDFND 179

  Fly   230 YQFTEAGLCFVFNTEISPASRQKAREDKYYPLRTPHYGEGSGLDLFLRLNRSFIRPGKRGINVMI 294
            :.....|.|..|||:...:|.:..          |.|    ||.:.:|.::....|......|:|
 Worm   180 FYNPSYGNCLQFNTDGMYSSSRAG----------PLY----GLRMVMRTDQDTYLPWTEASGVII 230

  Fly   295 KQPQQ----WSDVVRHVPHEAHTRISITPRFTVTDERTRTVTPEIRRCIFGDEVDNPHYKNFPDF 355
            ....|    :.||..:..... |..|:...:..|   ||...| ...|....::...||..    
 Worm   231 DIHMQDEIPYPDVFGYFAPPG-TASSLGVSYVQT---TRLSKP-YGSCTTKTKLKTTHYTG---- 286

  Fly   356 EYWVGNCRSRCHQEHVLNLCKCSPSIFFPISDKDNFTAC-----KASDFKCLYDNRFTFSIERHP 415
            .|.|..|...|.||.::..|.|....:...|:...:.:|     ..|:..|:             
 Worm   287 TYTVEACFRSCMQEKIIASCGCYYPAYSHASNTTQYVSCDNGVQTLSNLNCV------------- 338

  Fly   416 EEDDFVKN----PFKESMICDCFTSCSQLVFDRVFTTTTLDNNETDT------------------ 458
               |.:.:    .|.....|||...|.   .|....|.:.....:|:                  
 Worm   339 ---DLINSADSTEFDVLTDCDCPQPCE---IDSYGVTVSTAQWPSDSYVPTECNPGGPSGPWDAS 397

  Fly   459 --------EAGTMRLDIFYQSGWFIQYQTNMRFTFVELLASFGGIIGLFLGASLLSAFE-LAYYF 514
                    :|.|:.::|:|:...|.....:..:|||..::..||.:|||||.|::||.| |...|
 Worm   398 GESCLDWYKANTILIEIYYERMNFQVLTESPAYTFVNFISDVGGQVGLFLGMSIISAIEYLVLIF 462

  Fly   515 SIGLYLYIHGKRK 527
            .:..|...|..|:
 Worm   463 LVFFYCCTHKSRR 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk21NP_651704.2 ASC 51..513 CDD:279230 105/503 (21%)
del-4NP_492230.2 ASC 8..466 CDD:295594 107/515 (21%)
deg-1 14..460 CDD:273309 106/503 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28677
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.830

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