DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop1R2 and htr1ab

DIOPT Version :10

Sequence 1:NP_001263072.1 Gene:Dop1R2 / 43484 FlyBaseID:FBgn0266137 Length:807 Species:Drosophila melanogaster
Sequence 2:NP_001139238.1 Gene:htr1ab / 797538 ZFINID:ZDB-GENE-090409-2 Length:403 Species:Danio rerio


Alignment Length:400 Identity:142/400 - (35%)
Similarity:211/400 - (52%) Gaps:56/400 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 LLAFLFLFSFATVFGNSLVILAVIRERYLHTATNYFITSLAVADCLVGLVVMPFSALYEVLENTW 175
            |:..|.|.|   :|||:.|:.|:..||.|....||.|.||||.|.:|.::|:|.:|||:||:. |
Zfish    41 LIGALILCS---IFGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLVLPMAALYQVLDK-W 101

  Fly   176 FFGTDWCDIWRSLDVLFSTASILNLCVISLDRYWAITDPFSYPMRMTVKRAAGLIAAVWICSSAI 240
            ..|...|||:.|||:|..|:|||:||.|:||||||||||..|..:.|:||||.||...|....:|
Zfish   102 TLGQVTCDIFISLDILCCTSSILHLCAIALDRYWAITDPIDYMKKRTLKRAALLITVTWFVGFSI 166

  Fly   241 SFPAIVWWRAARDGEMPAYKCTFTEHLGYLVFSSTISFYLPLLVMVFTYCRIYRAAVIQTRS--- 302
            |.|.::..::     .|. .|..:....|.::|:..:||:||::|:..|.||::||..:.|.   
Zfish   167 SIPPMLIMKS-----QPK-TCMISHDPWYTIYSTFCAFYIPLILMLVLYGRIFKAARFRIRKTVR 225

  Fly   303 ---------LKIGTKQVLMASGELQLTLRIHRGGTTRDQQNQVSGGGGGGGGG----GGGGGSLS 354
                     |.:.......|:|||           :::.::.|.........|    ...|.||.
Zfish   226 KPEKKRVKCLTVSPALFKRANGEL-----------SKNWKSAVEPKPAACVNGAIKHAEDGESLE 279

  Fly   355 HSHSHSHHHHHNHGGGTTTSTPEEPDDEPLSALHNNGLARHRHMGKNFSLSRKLAKFAKEKKAAK 419
            ....||:..::       ...|..|:..|        |..::| .||....|||| .|:|:|..|
Zfish   280 IIEVHSNSKNN-------LPLPNTPNSVP--------LFENKH-EKNTEAKRKLA-LARERKTVK 327

  Fly   420 TLGIVMGVFIICWLPFFVVNLLSGFCIECIEHEEIVSAIVTWLGWINSCMNPVIYACWSRDFRRA 484
            ||||:||.||:||||||:..|:..||..|: ....:..::.|||:.||.:||:|||.:::||:.|
Zfish   328 TLGIIMGTFILCWLPFFIKALVMPFCPTCV-MPLWLQDVINWLGYSNSLLNPIIYAYFNKDFQSA 391

  Fly   485 FVRLL-CMCC 493
            |.::: |..|
Zfish   392 FKKIIKCHFC 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R2NP_001263072.1 7tmA_Dop1R2-like 122..485 CDD:320195 134/378 (35%)
TM helix 2 143..169 CDD:320195 13/25 (52%)
TM helix 3 182..212 CDD:320195 20/29 (69%)
TM helix 4 224..246 CDD:320195 10/21 (48%)
TM helix 5 266..295 CDD:320195 10/28 (36%)
TM helix 6 297..442 CDD:320195 43/160 (27%)
TM helix 7 453..478 CDD:320195 10/24 (42%)
htr1abNP_001139238.1 7tm_GPCRs 36..392 CDD:475119 138/389 (35%)
TM helix 1 38..62 CDD:320453 9/23 (39%)
TM helix 2 71..93 CDD:320453 11/21 (52%)
TM helix 3 109..131 CDD:320453 13/21 (62%)
TM helix 4 154..170 CDD:320453 5/15 (33%)
TM helix 5 187..210 CDD:320453 7/22 (32%)
TM helix 6 326..348 CDD:320453 15/21 (71%)
TM helix 7 360..385 CDD:320453 10/24 (42%)

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