DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dop1R2 and hrh2a

DIOPT Version :10

Sequence 1:NP_001263072.1 Gene:Dop1R2 / 43484 FlyBaseID:FBgn0266137 Length:807 Species:Drosophila melanogaster
Sequence 2:NP_001038803.2 Gene:hrh2a / 735303 ZFINID:ZDB-GENE-070531-4 Length:369 Species:Danio rerio


Alignment Length:466 Identity:142/466 - (30%)
Similarity:201/466 - (43%) Gaps:132/466 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 RVGLLAFLFLFSFATVFGNSLVILAVIRERYLHTATNYFITSLAVADCLVGLVVMPFSALYEVLE 172
            ::.|...|.:....||.||.||.|||...|.|...||.||.||||.|.|:|.:|:|||.||:| .
Zfish     4 QIALAVTLSVLILLTVSGNILVCLAVYATRRLRNVTNCFIVSLAVTDFLLGALVLPFSTLYQV-T 67

  Fly   173 NTWFFGTDWCDIWRSLDVLFSTASILNLCVISLDRYWAITDPFSYPMRMTVKRAAGLIAAVWICS 237
            ..|..|..:|:|:.||||:..|||||||..||||||:|:|.|..|||.:...|...::|.:|:.|
Zfish    68 GDWPLGAHFCNIYISLDVMLCTASILNLFAISLDRYFAVTAPLRYPMLVLPWRVGAILATIWLVS 132

  Fly   238 SAISF-PAIVWWRA-------ARDGEMPAYKCTFTEHLGYLVFSSTISFYLPLLVMVFTYCRIYR 294
            ..:|| |..:.|..       .|:|: .|..|.|..:..|.:..:..:||||||.|.::|.|::|
Zfish   133 VGVSFVPIHLGWNTRDLSVQNIREGD-HARDCRFELNPTYAIVDAFSTFYLPLLAMCWSYHRVFR 196

  Fly   295 AAVIQTRSLKIGTKQVLMASGELQLTLRIHRGGTTRDQQNQVSGGGGGGGGGGGGGGSLSHSHSH 359
            .|       ::..|:::..           |.|:|..|                           
Zfish   197 IA-------RMRAKRIIST-----------RRGSTSSQ--------------------------- 216

  Fly   360 SHHHHHNHGGGTTTSTPEEPDDEPLSALHNNGLARHRHMGKNFSLSRKLAKFAKEKKAAKTLGIV 424
                      |.|..|                                    .:|.||..||.:|
Zfish   217 ----------GVTILT------------------------------------LREHKATVTLAVV 235

  Fly   425 MGVFIICWLPFFVVNLLSGFCIECIEHEE----IVSAIVTWLGWINSCMNPVIYACWSRDFRRAF 485
            :|.|::||.|:|..     |.|..|.:||    ...::|.|||:.||.:|||:||..:||||.|:
Zfish   236 LGAFVVCWFPYFTF-----FTIMGIRNEENPPQTAQSVVLWLGYANSALNPVLYATLNRDFRSAY 295

  Fly   486 VRLLCMCCPRKIRRKYQPTMRSKSQCHVAAAMVAASTSFGY-HS---VNQIDRTLM------XRQ 540
            .:|||            ...|.|::..:..|..||.|..|: ||   ...:.||.:      .|.
Zfish   296 AKLLC------------GGRRCKTETTIPIAATAAGTMTGHAHSSKGAGFLPRTCVLLKDSENRM 348

  Fly   541 LSSCSTCSGGS 551
            |...|..:|.:
Zfish   349 LDDNSATNGAT 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dop1R2NP_001263072.1 7tmA_Dop1R2-like 122..485 CDD:320195 121/374 (32%)
TM helix 2 143..169 CDD:320195 16/25 (64%)
TM helix 3 182..212 CDD:320195 20/29 (69%)
TM helix 4 224..246 CDD:320195 7/22 (32%)
TM helix 5 266..295 CDD:320195 10/28 (36%)
TM helix 6 297..442 CDD:320195 20/144 (14%)
TM helix 7 453..478 CDD:320195 12/28 (43%)
hrh2aNP_001038803.2 7tmA_Histamine_H2R 5..295 CDD:320179 123/387 (32%)
TM helix 1 6..32 CDD:320179 11/25 (44%)
TM helix 2 39..66 CDD:320179 17/26 (65%)
TM helix 3 77..107 CDD:320179 20/29 (69%)
TM helix 4 119..139 CDD:320179 6/19 (32%)
TM helix 5 168..198 CDD:320179 11/29 (38%)
TM helix 6 223..253 CDD:320179 13/34 (38%)
TM helix 7 263..288 CDD:320179 11/24 (46%)

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